Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.58□□□□□ -0.23
RSPO4Q2I0M5 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RSPO4Q2I0M5 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
RSPO4Q2I0M5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 FAM86FP-201ENST00000338711 969 ntBASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 CCL19-202ENST00000378800 414 ntTSL 2 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 MIR181D-201ENST00000384853 137 ntBASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 ACTBP14-201ENST00000411655 1089 ntBASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 RPL3P2-204ENST00000413027 1203 ntBASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 AC004910.1-201ENST00000433493 787 ntBASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 YY1P2-201ENST00000438766 948 ntBASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 AL450346.2-201ENST00000495602 1024 ntBASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 MARK2P17-201ENST00000498560 841 ntBASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 AC099343.1-201ENST00000513481 609 ntBASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 KF455155.1-201ENST00000604493 303 ntBASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 TCAF2P1-201ENST00000291129 2421 ntBASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
RSPO4Q2I0M5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 SNORD88B-201ENST00000408454 91 ntBASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 AL627095.1-201ENST00000414775 321 ntBASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 AC000077.1-201ENST00000420012 953 ntBASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 CRIP1P2-201ENST00000425396 228 ntBASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 AC092865.2-201ENST00000439409 971 ntBASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 DUX4L31-201ENST00000446466 1136 ntBASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 TPT1P11-201ENST00000458482 498 ntBASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 AF186996.6-201ENST00000485294 149 ntBASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 AC093700.1-201ENST00000503348 717 ntBASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 AC023051.2-201ENST00000541141 460 ntBASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms