Protein–RNA interactions for Protein: Q01668

CACNA1D, Voltage-dependent L-type calcium channel subunit alpha-1D, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1DQ01668 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CACNA1DQ01668 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1DQ01668 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1DQ01668 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1DQ01668 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1DQ01668 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CACNA1DQ01668 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 SALL4P5-201ENST00000419001 1760 ntBASIC12.62□□□□□ -0.39
CACNA1DQ01668 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 AL390755.1-201ENST00000623716 2027 ntBASIC12.62□□□□□ -0.39
CACNA1DQ01668 AC104581.4-201ENST00000623126 3052 ntBASIC12.62□□□□□ -0.39
CACNA1DQ01668 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 AC007952.4-201ENST00000573866 637 ntBASIC12.62□□□□□ -0.39
CACNA1DQ01668 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 RN7SKP109-201ENST00000410592 316 ntBASIC12.62□□□□□ -0.39
CACNA1DQ01668 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 AC138696.2-201ENST00000607376 223 ntBASIC12.62□□□□□ -0.39
CACNA1DQ01668 AP000322.3-201ENST00000608665 388 ntBASIC12.62□□□□□ -0.39
CACNA1DQ01668 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.62□□□□□ -0.39
CACNA1DQ01668 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CACNA1DQ01668 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.61□□□□□ -0.39
CACNA1DQ01668 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.61□□□□□ -0.39
CACNA1DQ01668 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.61□□□□□ -0.39
CACNA1DQ01668 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
CACNA1DQ01668 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CACNA1DQ01668 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 AC232323.1-201ENST00000540724 2099 ntBASIC12.61□□□□□ -0.39
CACNA1DQ01668 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.61□□□□□ -0.39
CACNA1DQ01668 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.61□□□□□ -0.39
CACNA1DQ01668 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 RNA5SP359-201ENST00000364838 113 ntBASIC12.61□□□□□ -0.39
CACNA1DQ01668 PIFO-201ENST00000369737 746 ntTSL 2 BASIC12.61□□□□□ -0.39
CACNA1DQ01668 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CACNA1DQ01668 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CACNA1DQ01668 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 AC108734.2-201ENST00000420887 1069 ntBASIC12.61□□□□□ -0.39
CACNA1DQ01668 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.61□□□□□ -0.39
CACNA1DQ01668 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.61□□□□□ -0.39
CACNA1DQ01668 AC026434.2-201ENST00000506094 1078 ntBASIC12.61□□□□□ -0.39
CACNA1DQ01668 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.61□□□□□ -0.39
CACNA1DQ01668 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 URB1-AS1-201ENST00000534991 831 ntBASIC12.61□□□□□ -0.39
CACNA1DQ01668 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CACNA1DQ01668 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms