Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.8□□□□□ -0.36
CDK5Q00535 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.8□□□□□ -0.36
CDK5Q00535 MIR4783-201ENST00000580343 82 ntBASIC12.8□□□□□ -0.36
CDK5Q00535 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.8□□□□□ -0.36
CDK5Q00535 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CDK5Q00535 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.8□□□□□ -0.36
CDK5Q00535 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 AC008620.2-201ENST00000510294 1569 ntBASIC12.8□□□□□ -0.36
CDK5Q00535 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CDK5Q00535 LINC00115-201ENST00000473798 1317 ntBASIC12.8□□□□□ -0.36
CDK5Q00535 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CDK5Q00535 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CDK5Q00535 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.8□□□□□ -0.36
CDK5Q00535 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.8□□□□□ -0.36
CDK5Q00535 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CDK5Q00535 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
CDK5Q00535 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CDK5Q00535 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.8□□□□□ -0.36
CDK5Q00535 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CDK5Q00535 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.79□□□□□ -0.36
CDK5Q00535 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.79□□□□□ -0.36
CDK5Q00535 RPL13AP3-202ENST00000494676 1473 ntBASIC12.79□□□□□ -0.36
CDK5Q00535 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.79□□□□□ -0.36
CDK5Q00535 PI4KAP2-201ENST00000360806 2080 ntBASIC12.79□□□□□ -0.36
CDK5Q00535 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.79□□□□□ -0.36
CDK5Q00535 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CDK5Q00535 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CDK5Q00535 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CDK5Q00535 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.79□□□□□ -0.36
CDK5Q00535 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.79□□□□□ -0.36
CDK5Q00535 CNN2P10-201ENST00000443067 918 ntBASIC12.79□□□□□ -0.36
CDK5Q00535 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.79□□□□□ -0.36
CDK5Q00535 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.79□□□□□ -0.36
CDK5Q00535 PGAM1P5-201ENST00000548011 764 ntBASIC12.79□□□□□ -0.36
CDK5Q00535 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.79□□□□□ -0.36
CDK5Q00535 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.79□□□□□ -0.36
CDK5Q00535 AC233724.13-201ENST00000598383 410 ntBASIC12.79□□□□□ -0.36
CDK5Q00535 AL096865.1-201ENST00000606796 927 ntBASIC12.79□□□□□ -0.36
CDK5Q00535 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CDK5Q00535 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.79□□□□□ -0.36
CDK5Q00535 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CDK5Q00535 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.79□□□□□ -0.36
CDK5Q00535 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 Z98885.3-201ENST00000624882 1757 ntBASIC12.79□□□□□ -0.36
CDK5Q00535 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDK5Q00535 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CDK5Q00535 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.79□□□□□ -0.36
CDK5Q00535 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.79□□□□□ -0.36
CDK5Q00535 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.78□□□□□ -0.36
CDK5Q00535 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.78□□□□□ -0.36
CDK5Q00535 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CDK5Q00535 AL118506.1-201ENST00000601296 3082 ntBASIC12.78□□□□□ -0.36
CDK5Q00535 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.78□□□□□ -0.36
CDK5Q00535 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CDK5Q00535 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CDK5Q00535 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CDK5Q00535 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CDK5Q00535 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 CICP1-201ENST00000416803 2410 ntBASIC12.78□□□□□ -0.36
CDK5Q00535 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms