Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 CENPM-205ENST00000404067 905 ntTSL 3 BASIC10.05□□□□□ -0.8
CKS1BP61024 CENPM-206ENST00000407253 818 ntTSL 2 BASIC10.05□□□□□ -0.8
CKS1BP61024 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 COA5-202ENST00000409997 557 ntTSL 4 BASIC10.05□□□□□ -0.8
CKS1BP61024 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC10.05□□□□□ -0.8
CKS1BP61024 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.05□□□□□ -0.8
CKS1BP61024 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.05□□□□□ -0.8
CKS1BP61024 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC10.05□□□□□ -0.8
CKS1BP61024 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC10.05□□□□□ -0.8
CKS1BP61024 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC10.05□□□□□ -0.8
CKS1BP61024 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.05□□□□□ -0.8
CKS1BP61024 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 AC051619.7-201ENST00000568314 623 ntBASIC10.05□□□□□ -0.8
CKS1BP61024 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.05□□□□□ -0.8
CKS1BP61024 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
CKS1BP61024 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
CKS1BP61024 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.05□□□□□ -0.8
CKS1BP61024 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 LINC02473-201ENST00000569621 2195 ntTSL 2 BASIC10.05□□□□□ -0.8
CKS1BP61024 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 NTM-206ENST00000427481 2583 ntTSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
CKS1BP61024 AGGF1P1-201ENST00000509500 2073 ntBASIC10.05□□□□□ -0.8
CKS1BP61024 AP000437.1-201ENST00000624057 2085 ntBASIC10.05□□□□□ -0.8
CKS1BP61024 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.05□□□□□ -0.8
CKS1BP61024 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.05□□□□□ -0.8
CKS1BP61024 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
CKS1BP61024 AL137783.1-201ENST00000623494 1896 ntBASIC10.04□□□□□ -0.8
CKS1BP61024 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
CKS1BP61024 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.04□□□□□ -0.8
CKS1BP61024 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC10.04□□□□□ -0.8
CKS1BP61024 NT5C3AP1-202ENST00000441170 1663 ntBASIC10.04□□□□□ -0.8
CKS1BP61024 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
CKS1BP61024 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
CKS1BP61024 AL022342.1-201ENST00000400363 863 ntBASIC10.04□□□□□ -0.8
CKS1BP61024 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC10.04□□□□□ -0.8
CKS1BP61024 SLBP-205ENST00000488267 987 ntTSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 YBX1P5-201ENST00000509441 847 ntBASIC10.04□□□□□ -0.8
CKS1BP61024 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC10.04□□□□□ -0.8
CKS1BP61024 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.04□□□□□ -0.8
CKS1BP61024 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC10.04□□□□□ -0.8
CKS1BP61024 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC10.04□□□□□ -0.8
CKS1BP61024 AC000095.1-201ENST00000603208 874 ntBASIC10.04□□□□□ -0.8
CKS1BP61024 HOTTIP_1.1-201ENST00000620415 57 ntBASIC10.04□□□□□ -0.8
CKS1BP61024 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC10.04□□□□□ -0.8
CKS1BP61024 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC10.04□□□□□ -0.8
CKS1BP61024 RAB34-223ENST00000636154 730 ntTSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 AL445647.1-201ENST00000606221 3599 ntBASIC10.04□□□□□ -0.8
CKS1BP61024 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 AL354702.1-201ENST00000442006 1960 ntBASIC10.04□□□□□ -0.8
CKS1BP61024 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CKS1BP61024 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC10.04□□□□□ -0.8
CKS1BP61024 RNF10-201ENST00000325954 3825 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms