Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC007952.4-201ENST00000573866 637 ntBASIC13.77□□□□□ -0.21
PDX1P52945 MIR5196-201ENST00000578146 115 ntBASIC13.77□□□□□ -0.21
PDX1P52945 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.77□□□□□ -0.21
PDX1P52945 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.77□□□□□ -0.21
PDX1P52945 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.77□□□□□ -0.21
PDX1P52945 AC090386.2-201ENST00000623010 1039 ntBASIC13.77□□□□□ -0.21
PDX1P52945 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
PDX1P52945 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PDX1P52945 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PDX1P52945 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PDX1P52945 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.77□□□□□ -0.21
PDX1P52945 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDX1P52945 MYADML-201ENST00000474610 2147 ntBASIC13.76□□□□□ -0.21
PDX1P52945 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.76□□□□□ -0.21
PDX1P52945 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.76□□□□□ -0.21
PDX1P52945 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PDX1P52945 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PDX1P52945 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.76□□□□□ -0.21
PDX1P52945 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.76□□□□□ -0.21
PDX1P52945 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PDX1P52945 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PDX1P52945 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PDX1P52945 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC13.76□□□□□ -0.21
PDX1P52945 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC13.76□□□□□ -0.21
PDX1P52945 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.76□□□□□ -0.21
PDX1P52945 LINC00634-202ENST00000505157 222 ntBASIC13.76□□□□□ -0.21
PDX1P52945 ALG1L6P-201ENST00000515248 758 ntBASIC13.76□□□□□ -0.21
PDX1P52945 RNA5SP417-201ENST00000516459 108 ntBASIC13.76□□□□□ -0.21
PDX1P52945 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.76□□□□□ -0.21
PDX1P52945 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.76□□□□□ -0.21
PDX1P52945 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.76□□□□□ -0.21
PDX1P52945 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.76□□□□□ -0.21
PDX1P52945 MIR2392-201ENST00000584881 84 ntBASIC13.76□□□□□ -0.21
PDX1P52945 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.76□□□□□ -0.21
PDX1P52945 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PDX1P52945 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC13.76□□□□□ -0.21
PDX1P52945 AL591471.1-201ENST00000621855 229 ntBASIC13.76□□□□□ -0.21
PDX1P52945 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.76□□□□□ -0.21
PDX1P52945 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PDX1P52945 AC012617.1-204ENST00000586340 2305 ntBASIC13.76□□□□□ -0.21
PDX1P52945 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.76□□□□□ -0.21
PDX1P52945 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PDX1P52945 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.76□□□□□ -0.21
PDX1P52945 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PDX1P52945 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDX1P52945 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.75□□□□□ -0.21
PDX1P52945 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 AL928921.2-201ENST00000641325 2442 ntBASIC13.75□□□□□ -0.21
PDX1P52945 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.75□□□□□ -0.21
PDX1P52945 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.75□□□□□ -0.21
PDX1P52945 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.75□□□□□ -0.21
PDX1P52945 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.75□□□□□ -0.21
PDX1P52945 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
PDX1P52945 RN7SKP109-201ENST00000410592 316 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms