Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 AC006372.4-201ENST00000624122 1543 ntBASIC13.23□□□□□ -0.29
EFNA3P52797 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
EFNA3P52797 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.23□□□□□ -0.29
EFNA3P52797 KRT8P18-201ENST00000413425 1445 ntBASIC13.23□□□□□ -0.29
EFNA3P52797 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.23□□□□□ -0.29
EFNA3P52797 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.23□□□□□ -0.29
EFNA3P52797 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
EFNA3P52797 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.23□□□□□ -0.29
EFNA3P52797 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.23□□□□□ -0.29
EFNA3P52797 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.23□□□□□ -0.29
EFNA3P52797 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
EFNA3P52797 CHCHD2P2-201ENST00000503744 321 ntBASIC13.23□□□□□ -0.29
EFNA3P52797 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.23□□□□□ -0.29
EFNA3P52797 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.23□□□□□ -0.29
EFNA3P52797 NPM1P43-201ENST00000558669 786 ntBASIC13.23□□□□□ -0.29
EFNA3P52797 RN7SL665P-201ENST00000578793 300 ntBASIC13.23□□□□□ -0.29
EFNA3P52797 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.23□□□□□ -0.29
EFNA3P52797 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.23□□□□□ -0.29
EFNA3P52797 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.23□□□□□ -0.29
EFNA3P52797 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
EFNA3P52797 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.23□□□□□ -0.29
EFNA3P52797 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
EFNA3P52797 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
EFNA3P52797 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.23□□□□□ -0.29
EFNA3P52797 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
EFNA3P52797 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.23□□□□□ -0.29
EFNA3P52797 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
EFNA3P52797 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.23□□□□□ -0.29
EFNA3P52797 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
EFNA3P52797 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNA3P52797 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
EFNA3P52797 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.22□□□□□ -0.29
EFNA3P52797 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
EFNA3P52797 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
EFNA3P52797 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.22□□□□□ -0.29
EFNA3P52797 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 AC006987.1-201ENST00000413610 527 ntBASIC13.22□□□□□ -0.29
EFNA3P52797 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.22□□□□□ -0.29
EFNA3P52797 PPP1R2P4-201ENST00000424051 595 ntBASIC13.22□□□□□ -0.29
EFNA3P52797 AL512306.1-201ENST00000432698 848 ntBASIC13.22□□□□□ -0.29
EFNA3P52797 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.22□□□□□ -0.29
EFNA3P52797 AC098935.1-201ENST00000446057 611 ntBASIC13.22□□□□□ -0.29
EFNA3P52797 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.22□□□□□ -0.29
EFNA3P52797 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.22□□□□□ -0.29
EFNA3P52797 CHCHD2P9-201ENST00000461726 456 ntBASIC13.22□□□□□ -0.29
EFNA3P52797 AC130709.1-201ENST00000484779 1212 ntBASIC13.22□□□□□ -0.29
EFNA3P52797 RN7SL81P-201ENST00000493781 261 ntBASIC13.22□□□□□ -0.29
EFNA3P52797 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.22□□□□□ -0.29
EFNA3P52797 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 IQSEC3P1-201ENST00000538799 536 ntBASIC13.22□□□□□ -0.29
EFNA3P52797 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.22□□□□□ -0.29
EFNA3P52797 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.22□□□□□ -0.29
EFNA3P52797 AC135983.4-201ENST00000564116 1262 ntBASIC13.22□□□□□ -0.29
EFNA3P52797 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
EFNA3P52797 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.22□□□□□ -0.29
EFNA3P52797 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
EFNA3P52797 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.22□□□□□ -0.29
EFNA3P52797 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
EFNA3P52797 AC126335.2-201ENST00000623362 4637 ntBASIC13.22□□□□□ -0.29
EFNA3P52797 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.22□□□□□ -0.29
EFNA3P52797 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.21□□□□□ -0.29
EFNA3P52797 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms