Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDK7P50613 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDK7P50613 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDK7P50613 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CDK7P50613 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.56■□□□□ 0.08
CDK7P50613 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 GEMIN8P4-201ENST00000380526 729 ntBASIC15.56■□□□□ 0.08
CDK7P50613 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDK7P50613 AC092570.1-201ENST00000414446 469 ntBASIC15.56■□□□□ 0.08
CDK7P50613 AP000244.1-201ENST00000424582 201 ntBASIC15.56■□□□□ 0.08
CDK7P50613 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC15.56■□□□□ 0.08
CDK7P50613 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC15.56■□□□□ 0.08
CDK7P50613 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC15.56■□□□□ 0.08
CDK7P50613 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC15.56■□□□□ 0.08
CDK7P50613 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.56■□□□□ 0.08
CDK7P50613 AC087203.1-201ENST00000532111 1181 ntBASIC15.56■□□□□ 0.08
CDK7P50613 KNOP1P1-201ENST00000542108 989 ntBASIC15.56■□□□□ 0.08
CDK7P50613 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 AL512310.5-201ENST00000551999 515 ntBASIC15.56■□□□□ 0.08
CDK7P50613 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC15.56■□□□□ 0.08
CDK7P50613 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
CDK7P50613 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC15.56■□□□□ 0.08
CDK7P50613 AC005777.1-201ENST00000588332 187 ntBASIC15.56■□□□□ 0.08
CDK7P50613 AC073869.4-201ENST00000620841 800 ntBASIC15.56■□□□□ 0.08
CDK7P50613 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC15.56■□□□□ 0.08
CDK7P50613 SHMT1P1-201ENST00000419974 1312 ntBASIC15.56■□□□□ 0.08
CDK7P50613 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
CDK7P50613 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.56■□□□□ 0.08
CDK7P50613 TBC1D27-202ENST00000424239 1573 ntBASIC15.56■□□□□ 0.08
CDK7P50613 MYO15B-237ENST00000642007 4893 ntBASIC15.56■□□□□ 0.08
CDK7P50613 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.56■□□□□ 0.08
CDK7P50613 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.56■□□□□ 0.08
CDK7P50613 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CDK7P50613 AC005912.2-201ENST00000619492 2400 ntBASIC15.56■□□□□ 0.08
CDK7P50613 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CDK7P50613 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDK7P50613 AC015656.1-201ENST00000624209 3578 ntBASIC15.56■□□□□ 0.08
CDK7P50613 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.56■□□□□ 0.08
CDK7P50613 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDK7P50613 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CDK7P50613 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDK7P50613 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.55■□□□□ 0.08
CDK7P50613 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDK7P50613 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.55■□□□□ 0.08
CDK7P50613 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.55■□□□□ 0.08
CDK7P50613 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDK7P50613 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CDK7P50613 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 UROS-201ENST00000368774 744 ntTSL 2 BASIC15.55■□□□□ 0.08
CDK7P50613 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CDK7P50613 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 RPL3P2-204ENST00000413027 1203 ntBASIC15.55■□□□□ 0.08
CDK7P50613 AL512599.1-201ENST00000430724 685 ntBASIC15.55■□□□□ 0.08
CDK7P50613 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC15.55■□□□□ 0.08
CDK7P50613 SERBP1P2-201ENST00000436888 1164 ntBASIC15.55■□□□□ 0.08
CDK7P50613 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC15.55■□□□□ 0.08
CDK7P50613 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.55■□□□□ 0.08
CDK7P50613 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.55■□□□□ 0.08
CDK7P50613 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC15.55■□□□□ 0.08
CDK7P50613 AC005274.1-201ENST00000623460 802 ntBASIC15.55■□□□□ 0.08
CDK7P50613 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CDK7P50613 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CDK7P50613 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDK7P50613 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms