Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.78□□□□□ -0.04
MMP13P45452 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.78□□□□□ -0.04
MMP13P45452 AC022748.3-201ENST00000621828 275 ntBASIC14.78□□□□□ -0.04
MMP13P45452 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.78□□□□□ -0.04
MMP13P45452 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.78□□□□□ -0.04
MMP13P45452 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
MMP13P45452 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.78□□□□□ -0.04
MMP13P45452 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
MMP13P45452 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.78□□□□□ -0.04
MMP13P45452 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MMP13P45452 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.77□□□□□ -0.04
MMP13P45452 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MMP13P45452 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MMP13P45452 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
MMP13P45452 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
MMP13P45452 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MMP13P45452 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MMP13P45452 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MMP13P45452 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MMP13P45452 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.77□□□□□ -0.04
MMP13P45452 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
MMP13P45452 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MMP13P45452 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MMP13P45452 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
MMP13P45452 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.77□□□□□ -0.04
MMP13P45452 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MMP13P45452 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.77□□□□□ -0.05
MMP13P45452 VDAC1P1-201ENST00000439229 848 ntBASIC14.77□□□□□ -0.05
MMP13P45452 ST13P19-201ENST00000442505 1124 ntBASIC14.77□□□□□ -0.05
MMP13P45452 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.77□□□□□ -0.05
MMP13P45452 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MMP13P45452 SCARNA21-201ENST00000517026 139 ntBASIC14.77□□□□□ -0.05
MMP13P45452 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.77□□□□□ -0.05
MMP13P45452 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.77□□□□□ -0.05
MMP13P45452 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.77□□□□□ -0.05
MMP13P45452 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MMP13P45452 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.77□□□□□ -0.05
MMP13P45452 AP000346.4-201ENST00000614827 381 ntBASIC14.77□□□□□ -0.05
MMP13P45452 AL008638.5-201ENST00000623814 1298 ntBASIC14.77□□□□□ -0.05
MMP13P45452 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
MMP13P45452 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MMP13P45452 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MMP13P45452 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
MMP13P45452 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MMP13P45452 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
MMP13P45452 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MMP13P45452 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.77□□□□□ -0.05
MMP13P45452 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.77□□□□□ -0.05
MMP13P45452 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
MMP13P45452 POM121L14P-201ENST00000406100 1558 ntBASIC14.77□□□□□ -0.05
MMP13P45452 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.77□□□□□ -0.05
MMP13P45452 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
MMP13P45452 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
MMP13P45452 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.76□□□□□ -0.05
MMP13P45452 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
MMP13P45452 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.76□□□□□ -0.05
MMP13P45452 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
MMP13P45452 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.76□□□□□ -0.05
MMP13P45452 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
MMP13P45452 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.76□□□□□ -0.05
MMP13P45452 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
MMP13P45452 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.76□□□□□ -0.05
MMP13P45452 AC108725.1-201ENST00000495472 409 ntBASIC14.76□□□□□ -0.05
MMP13P45452 AC106794.1-201ENST00000506935 792 ntBASIC14.76□□□□□ -0.05
MMP13P45452 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
MMP13P45452 AC126915.1-201ENST00000522847 1038 ntBASIC14.76□□□□□ -0.05
MMP13P45452 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.76□□□□□ -0.05
MMP13P45452 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.76□□□□□ -0.05
MMP13P45452 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.76□□□□□ -0.05
MMP13P45452 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.76□□□□□ -0.05
MMP13P45452 RN7SL163P-201ENST00000583100 276 ntBASIC14.76□□□□□ -0.05
MMP13P45452 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
MMP13P45452 AC004923.1-202ENST00000642106 209 ntBASIC14.76□□□□□ -0.05
MMP13P45452 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.76□□□□□ -0.05
MMP13P45452 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP13P45452 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms