Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RFC3P40938 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.05□□□□□ -0.32
RFC3P40938 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.05□□□□□ -0.32
RFC3P40938 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.05□□□□□ -0.32
RFC3P40938 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.05□□□□□ -0.32
RFC3P40938 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RFC3P40938 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.05□□□□□ -0.32
RFC3P40938 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RFC3P40938 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.05□□□□□ -0.32
RFC3P40938 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.05□□□□□ -0.32
RFC3P40938 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.05□□□□□ -0.32
RFC3P40938 OR8T1P-201ENST00000421347 918 ntBASIC13.05□□□□□ -0.32
RFC3P40938 AL161932.2-201ENST00000435436 679 ntBASIC13.05□□□□□ -0.32
RFC3P40938 AC008267.1-201ENST00000474858 1069 ntBASIC13.05□□□□□ -0.32
RFC3P40938 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.05□□□□□ -0.32
RFC3P40938 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.05□□□□□ -0.32
RFC3P40938 AC138894.2-201ENST00000602838 371 ntBASIC13.05□□□□□ -0.32
RFC3P40938 AC092171.5-201ENST00000608012 942 ntBASIC13.05□□□□□ -0.32
RFC3P40938 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
RFC3P40938 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.05□□□□□ -0.32
RFC3P40938 AC242376.2-201ENST00000619355 883 ntBASIC13.05□□□□□ -0.32
RFC3P40938 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RFC3P40938 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.05□□□□□ -0.32
RFC3P40938 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RFC3P40938 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
RFC3P40938 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.05□□□□□ -0.32
RFC3P40938 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RFC3P40938 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
RFC3P40938 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 AC012617.1-204ENST00000586340 2305 ntBASIC13.05□□□□□ -0.32
RFC3P40938 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RFC3P40938 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
RFC3P40938 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
RFC3P40938 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.04□□□□□ -0.32
RFC3P40938 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
RFC3P40938 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.04□□□□□ -0.32
RFC3P40938 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.04□□□□□ -0.32
RFC3P40938 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.04□□□□□ -0.32
RFC3P40938 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RFC3P40938 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.04□□□□□ -0.32
RFC3P40938 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 AC073869.2-201ENST00000417338 1026 ntBASIC13.04□□□□□ -0.32
RFC3P40938 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 AC079112.1-201ENST00000454972 939 ntBASIC13.04□□□□□ -0.32
RFC3P40938 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.04□□□□□ -0.32
RFC3P40938 NDUFS6P1-201ENST00000485187 316 ntBASIC13.04□□□□□ -0.32
RFC3P40938 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.04□□□□□ -0.32
RFC3P40938 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.04□□□□□ -0.32
RFC3P40938 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.04□□□□□ -0.32
RFC3P40938 AC140658.4-201ENST00000561990 352 ntBASIC13.04□□□□□ -0.32
RFC3P40938 AC135983.4-201ENST00000564116 1262 ntBASIC13.04□□□□□ -0.32
RFC3P40938 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.04□□□□□ -0.32
RFC3P40938 COX6A1P2-201ENST00000620597 330 ntBASIC13.04□□□□□ -0.32
RFC3P40938 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
RFC3P40938 AC090386.2-201ENST00000623010 1039 ntBASIC13.04□□□□□ -0.32
RFC3P40938 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RFC3P40938 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.04□□□□□ -0.32
RFC3P40938 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RFC3P40938 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms