Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.57■□□□□ 0.08
USP8P40818 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
USP8P40818 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
USP8P40818 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
USP8P40818 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
USP8P40818 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC15.57■□□□□ 0.08
USP8P40818 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
USP8P40818 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
USP8P40818 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
USP8P40818 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
USP8P40818 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
USP8P40818 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
USP8P40818 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.56■□□□□ 0.08
USP8P40818 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
USP8P40818 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
USP8P40818 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC15.56■□□□□ 0.08
USP8P40818 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
USP8P40818 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
USP8P40818 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
USP8P40818 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
USP8P40818 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.56■□□□□ 0.08
USP8P40818 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.56■□□□□ 0.08
USP8P40818 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.56■□□□□ 0.08
USP8P40818 FAM21FP-201ENST00000426241 1131 ntBASIC15.56■□□□□ 0.08
USP8P40818 AL645933.1-201ENST00000440087 609 ntBASIC15.56■□□□□ 0.08
USP8P40818 KLF2P1-201ENST00000447438 1042 ntBASIC15.56■□□□□ 0.08
USP8P40818 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.56■□□□□ 0.08
USP8P40818 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.56■□□□□ 0.08
USP8P40818 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.56■□□□□ 0.08
USP8P40818 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.56■□□□□ 0.08
USP8P40818 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.56■□□□□ 0.08
USP8P40818 MIR4259-201ENST00000584466 101 ntBASIC15.56■□□□□ 0.08
USP8P40818 EEF1DP1-201ENST00000585891 896 ntBASIC15.56■□□□□ 0.08
USP8P40818 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.56■□□□□ 0.08
USP8P40818 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.56■□□□□ 0.08
USP8P40818 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.56■□□□□ 0.08
USP8P40818 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.56■□□□□ 0.08
USP8P40818 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
USP8P40818 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.56■□□□□ 0.08
USP8P40818 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.56■□□□□ 0.08
USP8P40818 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.56■□□□□ 0.08
USP8P40818 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC15.56■□□□□ 0.08
USP8P40818 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.56■□□□□ 0.08
USP8P40818 AC111170.3-201ENST00000624282 2464 ntBASIC15.56■□□□□ 0.08
USP8P40818 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
USP8P40818 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
USP8P40818 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.55■□□□□ 0.08
USP8P40818 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
USP8P40818 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
USP8P40818 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC15.55■□□□□ 0.08
USP8P40818 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.55■□□□□ 0.08
USP8P40818 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC15.55■□□□□ 0.08
USP8P40818 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.55■□□□□ 0.08
USP8P40818 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
USP8P40818 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.55■□□□□ 0.08
USP8P40818 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.55■□□□□ 0.08
USP8P40818 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 AC119751.2-201ENST00000504529 210 ntBASIC15.55■□□□□ 0.08
USP8P40818 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 MIR4783-201ENST00000580343 82 ntBASIC15.55■□□□□ 0.08
USP8P40818 AC005962.1-201ENST00000584100 773 ntBASIC15.55■□□□□ 0.08
USP8P40818 MIR6805-201ENST00000615055 62 ntBASIC15.55■□□□□ 0.08
USP8P40818 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
USP8P40818 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
USP8P40818 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms