Protein–RNA interactions for Protein: P29762

CRABP1, Cellular retinoic acid-binding protein 1, humanhuman

Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRABP1P29762 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CRABP1P29762 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CRABP1P29762 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.68□□□□□ -0.38
CRABP1P29762 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.68□□□□□ -0.38
CRABP1P29762 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.68□□□□□ -0.38
CRABP1P29762 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.68□□□□□ -0.38
CRABP1P29762 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.68□□□□□ -0.38
CRABP1P29762 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.68□□□□□ -0.38
CRABP1P29762 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.68□□□□□ -0.38
CRABP1P29762 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 MIR1909-201ENST00000411312 80 ntBASIC12.68□□□□□ -0.38
CRABP1P29762 KRT18P36-201ENST00000411618 1276 ntBASIC12.68□□□□□ -0.38
CRABP1P29762 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 ACA64.2-201ENST00000459014 129 ntBASIC12.68□□□□□ -0.38
CRABP1P29762 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.68□□□□□ -0.38
CRABP1P29762 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.68□□□□□ -0.38
CRABP1P29762 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.68□□□□□ -0.38
CRABP1P29762 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.68□□□□□ -0.38
CRABP1P29762 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.68□□□□□ -0.38
CRABP1P29762 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.68□□□□□ -0.38
CRABP1P29762 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.68□□□□□ -0.38
CRABP1P29762 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.68□□□□□ -0.38
CRABP1P29762 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.68□□□□□ -0.38
CRABP1P29762 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CRABP1P29762 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.68□□□□□ -0.38
CRABP1P29762 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 KRT8P29-201ENST00000420409 1371 ntBASIC12.68□□□□□ -0.38
CRABP1P29762 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CRABP1P29762 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.67□□□□□ -0.38
CRABP1P29762 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.67□□□□□ -0.38
CRABP1P29762 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.67□□□□□ -0.38
CRABP1P29762 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
CRABP1P29762 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CRABP1P29762 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CRABP1P29762 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CRABP1P29762 AL731571.1-201ENST00000617058 5428 ntBASIC12.67□□□□□ -0.38
CRABP1P29762 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.67□□□□□ -0.38
CRABP1P29762 FAM21FP-201ENST00000426241 1131 ntBASIC12.67□□□□□ -0.38
CRABP1P29762 XBP1P1-201ENST00000436573 652 ntBASIC12.67□□□□□ -0.38
CRABP1P29762 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.67□□□□□ -0.38
CRABP1P29762 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CRABP1P29762 OR2R1P-201ENST00000441404 914 ntBASIC12.67□□□□□ -0.38
CRABP1P29762 GPR53P-205ENST00000457298 1084 ntBASIC12.67□□□□□ -0.38
CRABP1P29762 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.67□□□□□ -0.38
CRABP1P29762 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.67□□□□□ -0.38
CRABP1P29762 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.67□□□□□ -0.38
CRABP1P29762 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.67□□□□□ -0.38
CRABP1P29762 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.67□□□□□ -0.38
CRABP1P29762 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.67□□□□□ -0.38
CRABP1P29762 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.67□□□□□ -0.38
CRABP1P29762 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CRABP1P29762 AC008805.1-201ENST00000590892 364 ntBASIC12.67□□□□□ -0.38
CRABP1P29762 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CRABP1P29762 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 TCAF1P1-201ENST00000414990 2232 ntBASIC12.67□□□□□ -0.38
CRABP1P29762 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.67□□□□□ -0.38
CRABP1P29762 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.67□□□□□ -0.38
CRABP1P29762 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.67□□□□□ -0.38
CRABP1P29762 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.67□□□□□ -0.38
CRABP1P29762 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CRABP1P29762 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms