Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD40P25942 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD40P25942 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD40P25942 AC139749.1-202ENST00000617529 3139 ntBASIC12.21□□□□□ -0.46
CD40P25942 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD40P25942 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CD40P25942 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD40P25942 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD40P25942 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
CD40P25942 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CD40P25942 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.21□□□□□ -0.46
CD40P25942 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CD40P25942 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD40P25942 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.21□□□□□ -0.46
CD40P25942 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.21□□□□□ -0.46
CD40P25942 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.2□□□□□ -0.46
CD40P25942 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.2□□□□□ -0.46
CD40P25942 HIST2H2BA-201ENST00000412169 381 ntBASIC12.2□□□□□ -0.46
CD40P25942 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CD40P25942 AC104784.1-201ENST00000473096 294 ntBASIC12.2□□□□□ -0.46
CD40P25942 AC095040.1-201ENST00000513286 675 ntBASIC12.2□□□□□ -0.46
CD40P25942 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.2□□□□□ -0.46
CD40P25942 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 KLF17P1-201ENST00000547105 1126 ntBASIC12.2□□□□□ -0.46
CD40P25942 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 RN7SL470P-201ENST00000583069 259 ntBASIC12.2□□□□□ -0.46
CD40P25942 AC107464.3-201ENST00000609172 737 ntBASIC12.2□□□□□ -0.46
CD40P25942 RN7SL736P-201ENST00000613111 269 ntBASIC12.2□□□□□ -0.46
CD40P25942 AC005618.3-201ENST00000624928 458 ntBASIC12.2□□□□□ -0.46
CD40P25942 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.2□□□□□ -0.46
CD40P25942 AL139158.3-201ENST00000641212 1562 ntBASIC12.2□□□□□ -0.46
CD40P25942 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CD40P25942 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CD40P25942 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.2□□□□□ -0.46
CD40P25942 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CD40P25942 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
CD40P25942 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.2□□□□□ -0.46
CD40P25942 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.2□□□□□ -0.46
CD40P25942 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD40P25942 KRT8P18-201ENST00000413425 1445 ntBASIC12.2□□□□□ -0.46
CD40P25942 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.2□□□□□ -0.46
CD40P25942 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.19□□□□□ -0.46
CD40P25942 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CD40P25942 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CD40P25942 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
CD40P25942 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.19□□□□□ -0.46
CD40P25942 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.19□□□□□ -0.46
CD40P25942 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC12.19□□□□□ -0.46
CD40P25942 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
CD40P25942 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD40P25942 RN7SKP109-201ENST00000410592 316 ntBASIC12.19□□□□□ -0.46
CD40P25942 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms