Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
COL8A2P25067 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
COL8A2P25067 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
COL8A2P25067 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC11.98□□□□□ -0.49
COL8A2P25067 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.98□□□□□ -0.49
COL8A2P25067 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
COL8A2P25067 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.98□□□□□ -0.49
COL8A2P25067 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 API5-208ENST00000531273 1868 ntTSL 2 BASIC11.98□□□□□ -0.49
COL8A2P25067 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
COL8A2P25067 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
COL8A2P25067 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 Z69890.1-201ENST00000382990 339 ntBASIC11.98□□□□□ -0.49
COL8A2P25067 BAX-205ENST00000391871 687 ntTSL 5 BASIC11.98□□□□□ -0.49
COL8A2P25067 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC11.98□□□□□ -0.49
COL8A2P25067 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC11.98□□□□□ -0.49
COL8A2P25067 AC008267.1-201ENST00000474858 1069 ntBASIC11.98□□□□□ -0.49
COL8A2P25067 AC130709.1-201ENST00000484779 1212 ntBASIC11.98□□□□□ -0.49
COL8A2P25067 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC11.98□□□□□ -0.49
COL8A2P25067 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
COL8A2P25067 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC11.98□□□□□ -0.49
COL8A2P25067 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
COL8A2P25067 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC11.98□□□□□ -0.49
COL8A2P25067 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 RN7SL555P-201ENST00000584742 339 ntBASIC11.98□□□□□ -0.49
COL8A2P25067 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC11.98□□□□□ -0.49
COL8A2P25067 COX6A1P2-201ENST00000620597 330 ntBASIC11.98□□□□□ -0.49
COL8A2P25067 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 YRDCP1-201ENST00000621419 643 ntBASIC11.98□□□□□ -0.49
COL8A2P25067 SNX1-214ENST00000625244 324 ntTSL 5 BASIC11.98□□□□□ -0.49
COL8A2P25067 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
COL8A2P25067 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
COL8A2P25067 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
COL8A2P25067 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
COL8A2P25067 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.98□□□□□ -0.49
COL8A2P25067 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.98□□□□□ -0.49
COL8A2P25067 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
COL8A2P25067 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.98□□□□□ -0.49
COL8A2P25067 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC11.97□□□□□ -0.49
COL8A2P25067 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.97□□□□□ -0.49
COL8A2P25067 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
COL8A2P25067 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
COL8A2P25067 AC007952.5-201ENST00000572818 1486 ntBASIC11.97□□□□□ -0.49
COL8A2P25067 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 DNAJB1P1-201ENST00000429417 1024 ntBASIC11.97□□□□□ -0.49
COL8A2P25067 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC11.97□□□□□ -0.49
COL8A2P25067 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC11.97□□□□□ -0.49
COL8A2P25067 RN7SL81P-201ENST00000493781 261 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms