Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AC011481.3-201ENST00000623895 5594 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB3BP20337 AP003969.2-201ENST00000623739 2275 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 PI4KAP2-201ENST00000360806 2080 ntBASIC12.49□□□□□ -0.41
RAB3BP20337 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB3BP20337 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RAB3BP20337 AC102953.2-201ENST00000609755 3026 ntBASIC12.48□□□□□ -0.41
RAB3BP20337 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
RAB3BP20337 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB3BP20337 SALL4P6-201ENST00000429385 1691 ntBASIC12.48□□□□□ -0.41
RAB3BP20337 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB3BP20337 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB3BP20337 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.48□□□□□ -0.41
RAB3BP20337 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB3BP20337 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RAB3BP20337 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
RAB3BP20337 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB3BP20337 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB3BP20337 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB3BP20337 AL035414.1-201ENST00000451327 857 ntBASIC12.48□□□□□ -0.41
RAB3BP20337 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB3BP20337 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB3BP20337 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.48□□□□□ -0.41
RAB3BP20337 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB3BP20337 ENPP7P14-201ENST00000621765 1040 ntBASIC12.48□□□□□ -0.41
RAB3BP20337 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB3BP20337 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB3BP20337 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 AC002350.2-201ENST00000623894 1828 ntBASIC12.48□□□□□ -0.41
RAB3BP20337 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RAB3BP20337 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB3BP20337 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RAB3BP20337 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RAB3BP20337 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB3BP20337 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB3BP20337 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB3BP20337 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB3BP20337 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB3BP20337 AC104758.3-203ENST00000562938 2123 ntBASIC12.47□□□□□ -0.41
RAB3BP20337 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB3BP20337 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB3BP20337 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RAB3BP20337 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB3BP20337 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RAB3BP20337 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
RAB3BP20337 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.47□□□□□ -0.41
RAB3BP20337 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.47□□□□□ -0.41
RAB3BP20337 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.47□□□□□ -0.41
RAB3BP20337 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB3BP20337 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
RAB3BP20337 AP001063.1-201ENST00000568332 529 ntBASIC12.47□□□□□ -0.41
RAB3BP20337 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB3BP20337 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
RAB3BP20337 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms