Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NFKB1P19838 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NFKB1P19838 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NFKB1P19838 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NFKB1P19838 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.42□□□□□ -0.1
NFKB1P19838 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 AC138969.2-201ENST00000532739 9932 ntBASIC14.42□□□□□ -0.1
NFKB1P19838 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NFKB1P19838 FAM86MP-201ENST00000340703 885 ntBASIC14.42□□□□□ -0.1
NFKB1P19838 RN7SKP214-201ENST00000364208 315 ntBASIC14.42□□□□□ -0.1
NFKB1P19838 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 AC006033.1-201ENST00000440505 426 ntBASIC14.42□□□□□ -0.1
NFKB1P19838 RN7SL530P-201ENST00000485097 298 ntBASIC14.42□□□□□ -0.1
NFKB1P19838 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.42□□□□□ -0.1
NFKB1P19838 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.42□□□□□ -0.1
NFKB1P19838 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.42□□□□□ -0.1
NFKB1P19838 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 AC026740.1-201ENST00000607068 791 ntBASIC14.42□□□□□ -0.1
NFKB1P19838 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 RPL13AP3-202ENST00000494676 1473 ntBASIC14.42□□□□□ -0.1
NFKB1P19838 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 AL139158.3-201ENST00000641212 1562 ntBASIC14.42□□□□□ -0.1
NFKB1P19838 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NFKB1P19838 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NFKB1P19838 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NFKB1P19838 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
NFKB1P19838 MARK2P9-201ENST00000430958 1727 ntBASIC14.41□□□□□ -0.1
NFKB1P19838 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.41□□□□□ -0.1
NFKB1P19838 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
NFKB1P19838 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.41□□□□□ -0.1
NFKB1P19838 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.41□□□□□ -0.1
NFKB1P19838 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.41□□□□□ -0.1
NFKB1P19838 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NFKB1P19838 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.41□□□□□ -0.1
NFKB1P19838 MIR4538-201ENST00000581377 78 ntBASIC14.41□□□□□ -0.1
NFKB1P19838 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.41□□□□□ -0.1
NFKB1P19838 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NFKB1P19838 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.41□□□□□ -0.1
NFKB1P19838 AC243960.2-201ENST00000600996 747 ntBASIC14.41□□□□□ -0.1
NFKB1P19838 AL645939.5-201ENST00000606834 243 ntBASIC14.41□□□□□ -0.1
NFKB1P19838 AC138649.2-201ENST00000615886 705 ntBASIC14.41□□□□□ -0.1
NFKB1P19838 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.41□□□□□ -0.1
NFKB1P19838 CR392039.2-201ENST00000623182 509 ntBASIC14.41□□□□□ -0.1
NFKB1P19838 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.41□□□□□ -0.1
NFKB1P19838 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms