Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
PRKCAP17252 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PRKCAP17252 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PRKCAP17252 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PRKCAP17252 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PRKCAP17252 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
PRKCAP17252 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PRKCAP17252 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.24□□□□□ -0.29
PRKCAP17252 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PRKCAP17252 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
PRKCAP17252 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.24□□□□□ -0.29
PRKCAP17252 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PRKCAP17252 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.24□□□□□ -0.29
PRKCAP17252 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.24□□□□□ -0.29
PRKCAP17252 BX324167.2-201ENST00000623717 3316 ntBASIC13.24□□□□□ -0.29
PRKCAP17252 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PRKCAP17252 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PRKCAP17252 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PRKCAP17252 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PRKCAP17252 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.23□□□□□ -0.29
PRKCAP17252 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.23□□□□□ -0.29
PRKCAP17252 AC064801.2-201ENST00000625052 1303 ntBASIC13.23□□□□□ -0.29
PRKCAP17252 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.23□□□□□ -0.29
PRKCAP17252 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.23□□□□□ -0.29
PRKCAP17252 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
PRKCAP17252 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PRKCAP17252 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
PRKCAP17252 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.23□□□□□ -0.29
PRKCAP17252 AL161932.2-201ENST00000435436 679 ntBASIC13.23□□□□□ -0.29
PRKCAP17252 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 AL591846.1-201ENST00000451736 433 ntBASIC13.23□□□□□ -0.29
PRKCAP17252 TUBB8P8-201ENST00000458717 1058 ntBASIC13.23□□□□□ -0.29
PRKCAP17252 AC021723.1-201ENST00000486306 515 ntBASIC13.23□□□□□ -0.29
PRKCAP17252 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.23□□□□□ -0.29
PRKCAP17252 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.23□□□□□ -0.29
PRKCAP17252 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.23□□□□□ -0.29
PRKCAP17252 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.23□□□□□ -0.29
PRKCAP17252 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.23□□□□□ -0.29
PRKCAP17252 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.23□□□□□ -0.29
PRKCAP17252 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PRKCAP17252 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PRKCAP17252 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 VENTXP1-201ENST00000569334 2716 ntBASIC13.23□□□□□ -0.29
PRKCAP17252 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.23□□□□□ -0.29
PRKCAP17252 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PRKCAP17252 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PRKCAP17252 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PRKCAP17252 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.22□□□□□ -0.29
PRKCAP17252 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.22□□□□□ -0.29
PRKCAP17252 KRT8P29-201ENST00000420409 1371 ntBASIC13.22□□□□□ -0.29
PRKCAP17252 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
PRKCAP17252 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.22□□□□□ -0.29
PRKCAP17252 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms