Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.34□□□□□ -0.27
CTSBP07858 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CTSBP07858 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CTSBP07858 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CTSBP07858 AC104581.4-201ENST00000623126 3052 ntBASIC13.33□□□□□ -0.27
CTSBP07858 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.33□□□□□ -0.27
CTSBP07858 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
CTSBP07858 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
CTSBP07858 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.33□□□□□ -0.28
CTSBP07858 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CTSBP07858 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.33□□□□□ -0.28
CTSBP07858 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CTSBP07858 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.33□□□□□ -0.28
CTSBP07858 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 RN7SL8P-201ENST00000461771 266 ntBASIC13.33□□□□□ -0.28
CTSBP07858 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CTSBP07858 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
CTSBP07858 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.33□□□□□ -0.28
CTSBP07858 KRT8P2-201ENST00000556193 944 ntBASIC13.33□□□□□ -0.28
CTSBP07858 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
CTSBP07858 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
CTSBP07858 MIR6858-201ENST00000620733 67 ntBASIC13.33□□□□□ -0.28
CTSBP07858 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CTSBP07858 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.33□□□□□ -0.28
CTSBP07858 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CTSBP07858 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.33□□□□□ -0.28
CTSBP07858 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
CTSBP07858 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.33□□□□□ -0.28
CTSBP07858 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.33□□□□□ -0.28
CTSBP07858 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
CTSBP07858 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.33□□□□□ -0.28
CTSBP07858 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.33□□□□□ -0.28
CTSBP07858 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CTSBP07858 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CTSBP07858 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.32□□□□□ -0.28
CTSBP07858 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.32□□□□□ -0.28
CTSBP07858 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CTSBP07858 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CTSBP07858 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.32□□□□□ -0.28
CTSBP07858 LINC00265-2P-201ENST00000413372 782 ntBASIC13.32□□□□□ -0.28
CTSBP07858 OR52M2P-201ENST00000414298 959 ntBASIC13.32□□□□□ -0.28
CTSBP07858 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.32□□□□□ -0.28
CTSBP07858 AC092573.1-201ENST00000433054 884 ntBASIC13.32□□□□□ -0.28
CTSBP07858 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 DPY19L2P5-201ENST00000456300 331 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms