Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.01■□□□□ 0.47
COL5A2P05997 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC18.01■□□□□ 0.47
COL5A2P05997 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
COL5A2P05997 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
COL5A2P05997 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.01■□□□□ 0.47
COL5A2P05997 AC026271.1-201ENST00000447794 1348 ntBASIC18.01■□□□□ 0.47
COL5A2P05997 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
COL5A2P05997 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
COL5A2P05997 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 AL121994.1-201ENST00000413189 402 ntBASIC18.01■□□□□ 0.47
COL5A2P05997 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC18.01■□□□□ 0.47
COL5A2P05997 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
COL5A2P05997 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
COL5A2P05997 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC18.01■□□□□ 0.47
COL5A2P05997 SLC25A15P1-201ENST00000456738 342 ntBASIC18.01■□□□□ 0.47
COL5A2P05997 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 AC103724.2-201ENST00000520355 476 ntBASIC18.01■□□□□ 0.47
COL5A2P05997 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC18.01■□□□□ 0.47
COL5A2P05997 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC18.01■□□□□ 0.47
COL5A2P05997 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
COL5A2P05997 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC18.01■□□□□ 0.47
COL5A2P05997 AL450487.2-201ENST00000615934 407 ntBASIC18.01■□□□□ 0.47
COL5A2P05997 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC18.01■□□□□ 0.47
COL5A2P05997 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
COL5A2P05997 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
COL5A2P05997 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
COL5A2P05997 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18■□□□□ 0.47
COL5A2P05997 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 SERF2-204ENST00000402131 586 ntTSL 2 BASIC18■□□□□ 0.47
COL5A2P05997 SNORD23-201ENST00000408876 110 ntBASIC18■□□□□ 0.47
COL5A2P05997 AC093106.1-201ENST00000437271 352 ntBASIC18■□□□□ 0.47
COL5A2P05997 AC053503.3-201ENST00000448375 114 ntBASIC18■□□□□ 0.47
COL5A2P05997 AC104115.1-201ENST00000484005 623 ntBASIC18■□□□□ 0.47
COL5A2P05997 PIGCP1-201ENST00000527583 895 ntBASIC18■□□□□ 0.47
COL5A2P05997 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC18■□□□□ 0.47
COL5A2P05997 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
COL5A2P05997 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC18■□□□□ 0.47
COL5A2P05997 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
COL5A2P05997 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC18■□□□□ 0.47
COL5A2P05997 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
COL5A2P05997 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL5A2P05997 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC17.99■□□□□ 0.47
COL5A2P05997 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
COL5A2P05997 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
COL5A2P05997 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC17.99■□□□□ 0.47
COL5A2P05997 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COL5A2P05997 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 AC012358.2-201ENST00000430010 1434 ntBASIC17.99■□□□□ 0.47
COL5A2P05997 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 HMGA1P2-201ENST00000430198 324 ntBASIC17.99■□□□□ 0.47
COL5A2P05997 AL161727.1-201ENST00000457409 530 ntBASIC17.99■□□□□ 0.47
COL5A2P05997 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC17.99■□□□□ 0.47
COL5A2P05997 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC17.99■□□□□ 0.47
COL5A2P05997 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC17.99■□□□□ 0.47
COL5A2P05997 AC136475.7-201ENST00000602949 592 ntBASIC17.99■□□□□ 0.47
COL5A2P05997 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
COL5A2P05997 AL137028.2-201ENST00000614601 256 ntBASIC17.99■□□□□ 0.47
COL5A2P05997 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC17.99■□□□□ 0.47
COL5A2P05997 Z82244.2-201ENST00000632196 448 ntBASIC17.99■□□□□ 0.47
COL5A2P05997 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.99■□□□□ 0.47
COL5A2P05997 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
COL5A2P05997 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
COL5A2P05997 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
COL5A2P05997 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
COL5A2P05997 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
COL5A2P05997 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms