Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 FP325330.2-201ENST00000624219 5630 ntBASIC15.22■□□□□ 0.03
TUBB4AP04350 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TUBB4AP04350 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBB4AP04350 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBB4AP04350 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBB4AP04350 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TUBB4AP04350 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC15.21■□□□□ 0.03
TUBB4AP04350 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 Z98885.3-201ENST00000624882 1757 ntBASIC15.21■□□□□ 0.03
TUBB4AP04350 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.21■□□□□ 0.03
TUBB4AP04350 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBB4AP04350 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TUBB4AP04350 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TUBB4AP04350 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TUBB4AP04350 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBB4AP04350 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBB4AP04350 LINC00563-201ENST00000566370 1400 ntBASIC15.21■□□□□ 0.03
TUBB4AP04350 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.21■□□□□ 0.03
TUBB4AP04350 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBB4AP04350 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TUBB4AP04350 RN7SKP175-201ENST00000408472 289 ntBASIC15.21■□□□□ 0.03
TUBB4AP04350 POM121L8P-201ENST00000417732 1281 ntBASIC15.21■□□□□ 0.03
TUBB4AP04350 POM121L9P-203ENST00000441984 1285 ntBASIC15.21■□□□□ 0.03
TUBB4AP04350 FAM86GP-201ENST00000448322 971 ntBASIC15.21■□□□□ 0.03
TUBB4AP04350 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.21■□□□□ 0.03
TUBB4AP04350 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBB4AP04350 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TUBB4AP04350 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.21■□□□□ 0.03
TUBB4AP04350 AC109322.1-201ENST00000524499 1264 ntBASIC15.21■□□□□ 0.03
TUBB4AP04350 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TUBB4AP04350 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.21■□□□□ 0.03
TUBB4AP04350 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.21■□□□□ 0.03
TUBB4AP04350 AC021016.3-201ENST00000608367 477 ntBASIC15.21■□□□□ 0.03
TUBB4AP04350 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.21■□□□□ 0.03
TUBB4AP04350 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 CSPG4P11-201ENST00000560634 4910 ntBASIC15.21■□□□□ 0.03
TUBB4AP04350 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 PCDHB17P-202ENST00000623466 3066 ntBASIC15.21■□□□□ 0.03
TUBB4AP04350 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.21■□□□□ 0.03
TUBB4AP04350 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TUBB4AP04350 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBB4AP04350 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC15.21■□□□□ 0.02
TUBB4AP04350 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBB4AP04350 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBB4AP04350 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TUBB4AP04350 AL031432.4-201ENST00000641729 2190 ntBASIC15.21■□□□□ 0.02
TUBB4AP04350 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBB4AP04350 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.21■□□□□ 0.02
TUBB4AP04350 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBB4AP04350 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TUBB4AP04350 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TUBB4AP04350 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TUBB4AP04350 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TUBB4AP04350 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TUBB4AP04350 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TUBB4AP04350 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 TUBB2BP1-201ENST00000404155 871 ntBASIC15.2■□□□□ 0.02
TUBB4AP04350 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBB4AP04350 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.2■□□□□ 0.02
TUBB4AP04350 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBB4AP04350 AC093433.1-201ENST00000458048 571 ntBASIC15.2■□□□□ 0.02
TUBB4AP04350 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.2■□□□□ 0.02
TUBB4AP04350 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.2■□□□□ 0.02
TUBB4AP04350 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.2■□□□□ 0.02
TUBB4AP04350 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TUBB4AP04350 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms