Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 IGHVII-74-1-201ENST00000517572 241 ntBASIC14□□□□□ -0.17
PDGFBP01127 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC14□□□□□ -0.17
PDGFBP01127 ABCD1P3-201ENST00000562927 605 ntBASIC14□□□□□ -0.17
PDGFBP01127 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC14□□□□□ -0.17
PDGFBP01127 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14□□□□□ -0.17
PDGFBP01127 NAT9-204ENST00000578822 839 ntTSL 3 BASIC14□□□□□ -0.17
PDGFBP01127 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PDGFBP01127 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14□□□□□ -0.17
PDGFBP01127 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14□□□□□ -0.17
PDGFBP01127 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PDGFBP01127 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PDGFBP01127 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14□□□□□ -0.17
PDGFBP01127 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14□□□□□ -0.17
PDGFBP01127 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.99□□□□□ -0.17
PDGFBP01127 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.99□□□□□ -0.17
PDGFBP01127 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.99□□□□□ -0.17
PDGFBP01127 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.99□□□□□ -0.17
PDGFBP01127 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 AC106785.2-201ENST00000564385 1319 ntBASIC13.99□□□□□ -0.17
PDGFBP01127 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.99□□□□□ -0.17
PDGFBP01127 AC018442.1-201ENST00000421439 2061 ntBASIC13.99□□□□□ -0.17
PDGFBP01127 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.99□□□□□ -0.17
PDGFBP01127 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 HSD3BP1-201ENST00000286193 1111 ntBASIC13.99□□□□□ -0.17
PDGFBP01127 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC13.99□□□□□ -0.17
PDGFBP01127 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 AC103592.1-201ENST00000394513 664 ntBASIC13.99□□□□□ -0.17
PDGFBP01127 THAP4-203ENST00000402545 833 ntTSL 5 BASIC13.99□□□□□ -0.17
PDGFBP01127 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC13.99□□□□□ -0.17
PDGFBP01127 CA5BP1-205ENST00000435806 1064 ntBASIC13.99□□□□□ -0.17
PDGFBP01127 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC13.99□□□□□ -0.17
PDGFBP01127 OR4A49P-201ENST00000527050 632 ntBASIC13.99□□□□□ -0.17
PDGFBP01127 PHBP18-201ENST00000546648 813 ntBASIC13.99□□□□□ -0.17
PDGFBP01127 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
PDGFBP01127 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC13.99□□□□□ -0.17
PDGFBP01127 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC13.99□□□□□ -0.17
PDGFBP01127 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC13.99□□□□□ -0.17
PDGFBP01127 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC13.99□□□□□ -0.17
PDGFBP01127 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
PDGFBP01127 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
PDGFBP01127 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.99□□□□□ -0.17
PDGFBP01127 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.99□□□□□ -0.17
PDGFBP01127 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.99□□□□□ -0.17
PDGFBP01127 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.99□□□□□ -0.17
PDGFBP01127 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDGFBP01127 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
PDGFBP01127 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC13.98□□□□□ -0.17
PDGFBP01127 PES1P2-201ENST00000449745 1735 ntBASIC13.98□□□□□ -0.17
PDGFBP01127 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.98□□□□□ -0.17
PDGFBP01127 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
PDGFBP01127 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC13.98□□□□□ -0.17
PDGFBP01127 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
PDGFBP01127 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDGFBP01127 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDGFBP01127 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDGFBP01127 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDGFBP01127 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.98□□□□□ -0.17
PDGFBP01127 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PDGFBP01127 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDGFBP01127 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDGFBP01127 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.98□□□□□ -0.17
PDGFBP01127 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDGFBP01127 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDGFBP01127 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDGFBP01127 MIR1226-201ENST00000408658 75 ntBASIC13.98□□□□□ -0.17
PDGFBP01127 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
PDGFBP01127 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC13.98□□□□□ -0.17
PDGFBP01127 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC13.98□□□□□ -0.17
PDGFBP01127 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC13.98□□□□□ -0.17
PDGFBP01127 RNA5SP288-201ENST00000516075 93 ntBASIC13.98□□□□□ -0.17
PDGFBP01127 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.98□□□□□ -0.17
PDGFBP01127 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC13.98□□□□□ -0.17
PDGFBP01127 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC13.98□□□□□ -0.17
PDGFBP01127 SNX20-205ENST00000610485 557 ntTSL 5 BASIC13.98□□□□□ -0.17
PDGFBP01127 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PDGFBP01127 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.98□□□□□ -0.17
PDGFBP01127 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PDGFBP01127 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms