Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
EXTL3O43909 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EXTL3O43909 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
EXTL3O43909 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.34■□□□□ 0.05
EXTL3O43909 AL365209.1-201ENST00000624418 6473 ntBASIC15.34■□□□□ 0.05
EXTL3O43909 KRT8P43-201ENST00000406052 1458 ntBASIC15.33■□□□□ 0.05
EXTL3O43909 AC004554.1-201ENST00000422830 1468 ntBASIC15.33■□□□□ 0.05
EXTL3O43909 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.33■□□□□ 0.05
EXTL3O43909 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
EXTL3O43909 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
EXTL3O43909 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
EXTL3O43909 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
EXTL3O43909 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
EXTL3O43909 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
EXTL3O43909 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.33■□□□□ 0.05
EXTL3O43909 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.33■□□□□ 0.04
EXTL3O43909 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
EXTL3O43909 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
EXTL3O43909 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.33■□□□□ 0.04
EXTL3O43909 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.33■□□□□ 0.04
EXTL3O43909 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.33■□□□□ 0.04
EXTL3O43909 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.33■□□□□ 0.04
EXTL3O43909 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.33■□□□□ 0.04
EXTL3O43909 PPP1R2P4-201ENST00000424051 595 ntBASIC15.33■□□□□ 0.04
EXTL3O43909 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.33■□□□□ 0.04
EXTL3O43909 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.33■□□□□ 0.04
EXTL3O43909 LDHBP1-201ENST00000455730 1119 ntBASIC15.33■□□□□ 0.04
EXTL3O43909 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.33■□□□□ 0.04
EXTL3O43909 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.33■□□□□ 0.04
EXTL3O43909 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.33■□□□□ 0.04
EXTL3O43909 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
EXTL3O43909 AL133499.1-201ENST00000596207 608 ntBASIC15.33■□□□□ 0.04
EXTL3O43909 AC007718.1-201ENST00000621078 280 ntBASIC15.33■□□□□ 0.04
EXTL3O43909 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
EXTL3O43909 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.33■□□□□ 0.04
EXTL3O43909 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.33■□□□□ 0.04
EXTL3O43909 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.33■□□□□ 0.04
EXTL3O43909 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
EXTL3O43909 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
EXTL3O43909 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.33■□□□□ 0.04
EXTL3O43909 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
EXTL3O43909 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
EXTL3O43909 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
EXTL3O43909 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
EXTL3O43909 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EXTL3O43909 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.32■□□□□ 0.04
EXTL3O43909 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.32■□□□□ 0.04
EXTL3O43909 AC008620.2-201ENST00000510294 1569 ntBASIC15.32■□□□□ 0.04
EXTL3O43909 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.32■□□□□ 0.04
EXTL3O43909 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.32■□□□□ 0.04
EXTL3O43909 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
EXTL3O43909 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
EXTL3O43909 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
EXTL3O43909 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.32■□□□□ 0.04
EXTL3O43909 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.32■□□□□ 0.04
EXTL3O43909 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.32■□□□□ 0.04
EXTL3O43909 AC234782.1-201ENST00000451950 919 ntBASIC15.32■□□□□ 0.04
EXTL3O43909 CEP164P1-201ENST00000455142 418 ntBASIC15.32■□□□□ 0.04
EXTL3O43909 RPL18AP8-201ENST00000486071 528 ntBASIC15.32■□□□□ 0.04
EXTL3O43909 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.32■□□□□ 0.04
EXTL3O43909 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.32■□□□□ 0.04
EXTL3O43909 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
EXTL3O43909 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.32■□□□□ 0.04
EXTL3O43909 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
EXTL3O43909 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.32■□□□□ 0.04
EXTL3O43909 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.32■□□□□ 0.04
EXTL3O43909 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.32■□□□□ 0.04
EXTL3O43909 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 AC072061.1-201ENST00000569710 2234 ntBASIC15.32■□□□□ 0.04
EXTL3O43909 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EXTL3O43909 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms