Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 OR2R1P-201ENST00000441404 914 ntBASIC14.44□□□□□ -0.1
CCDC78A2IDD5 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 TMEM198B-204ENST00000484016 896 ntBASIC14.44□□□□□ -0.1
CCDC78A2IDD5 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 BAP1-211ENST00000615113 489 ntBASIC14.44□□□□□ -0.1
CCDC78A2IDD5 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 CCT8L1P-201ENST00000465400 1674 ntBASIC14.44□□□□□ -0.1
CCDC78A2IDD5 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 AC004899.1-201ENST00000424687 1714 ntBASIC14.44□□□□□ -0.1
CCDC78A2IDD5 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 KRT18P36-201ENST00000411618 1276 ntBASIC14.43□□□□□ -0.1
CCDC78A2IDD5 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 VDAC1P1-201ENST00000439229 848 ntBASIC14.43□□□□□ -0.1
CCDC78A2IDD5 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 PGAM1P5-201ENST00000548011 764 ntBASIC14.43□□□□□ -0.1
CCDC78A2IDD5 AL583810.1-201ENST00000553344 1045 ntBASIC14.43□□□□□ -0.1
CCDC78A2IDD5 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 AC104982.3-201ENST00000581995 514 ntBASIC14.43□□□□□ -0.1
CCDC78A2IDD5 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.43□□□□□ -0.1
CCDC78A2IDD5 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 KRT8P29-201ENST00000420409 1371 ntBASIC14.43□□□□□ -0.1
CCDC78A2IDD5 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC78A2IDD5 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms