Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SNORA80B-201ENST00000383906 136 ntBASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 AL139220.1-201ENST00000436802 520 ntBASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 AC118553.1-201ENST00000454219 655 ntTSL 2 BASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 KRT18P63-201ENST00000505463 979 ntBASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 AC087441.1-201ENST00000531069 301 ntBASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 MIR4296-201ENST00000581038 88 ntBASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 AC090236.1-201ENST00000590318 768 ntTSL 2 BASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIMBP3Q9UFD9 RNA5SP469-201ENST00000364165 109 ntBASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 MIR197-201ENST00000384976 75 ntBASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 LINC00424-201ENST00000413124 654 ntTSL 4 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 AC018511.1-201ENST00000436608 380 ntTSL 5 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 AL096677.1-201ENST00000442884 814 ntTSL 3 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 MEG3-223ENST00000524131 721 ntTSL 5 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 AP001107.8-201ENST00000530805 479 ntTSL 3 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 AC091588.2-201ENST00000578741 366 ntTSL 3 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 AL137785.1-201ENST00000637466 490 ntTSL 5 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 TTLL1-202ENST00000331018 1185 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 RN7SL225P-201ENST00000464648 298 ntBASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 DIO2-206ENST00000555750 1049 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 MIR3940-201ENST00000579148 102 ntBASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 AL590556.2-201ENST00000637118 1162 ntTSL 5 BASIC21.22■□□□□ 0.99
RIMBP3Q9UFD9 FAM49B-220ENST00000522250 1647 ntTSL 5 BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 ZNF343-202ENST00000358413 771 ntTSL 5 BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 SULT1A3-202ENST00000395138 1326 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 AGFG1-203ENST00000409171 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 MAS1LP1-206ENST00000419416 1047 ntBASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 PQLC2L-204ENST00000459838 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 PQLC2L-206ENST00000468043 883 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 E2F6P4-201ENST00000468625 514 ntBASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 LINC00929-202ENST00000556159 1169 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 AKR1B1P7-201ENST00000587229 952 ntBASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 HKR1-222ENST00000591417 525 ntTSL 4 BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 AC010524.1-201ENST00000596488 494 ntTSL 3 BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 AL513497.1-201ENST00000624273 2083 ntBASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 CGREF1-209ENST00000640154 336 ntTSL 5 BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIMBP3Q9UFD9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC21.2■□□□□ 0.99
RIMBP3Q9UFD9 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 CHN2-209ENST00000421775 825 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 CYP4F60P-201ENST00000439449 549 ntBASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 AL353807.2-201ENST00000456382 220 ntTSL 5 BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 Z93930.2-203ENST00000585003 516 ntBASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 AC020663.2-201ENST00000592465 720 ntTSL 3 BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 AL157392.3-218ENST00000600249 773 ntTSL 5 BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 UROD-221ENST00000636293 1102 ntTSL 5 BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 LINC00643-207ENST00000637212 734 ntBASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 AC018442.1-201ENST00000421439 2061 ntBASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 APTX-206ENST00000379825 2023 ntTSL 2 BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIMBP3Q9UFD9 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms