Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 AC008267.1-201ENST00000474858 1069 ntBASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 SIGLEC22P-201ENST00000599104 714 ntBASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 AC092978.1-202ENST00000637590 1327 ntBASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMG20BQ9P0W2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 GUSBP10-201ENST00000417412 665 ntBASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 ERP29P1-201ENST00000442902 706 ntBASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 RPL18AP3-201ENST00000462885 528 ntBASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 GOLGA2P8-201ENST00000505201 779 ntBASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 AC138701.2-201ENST00000553634 226 ntBASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 DNM1P30-201ENST00000563586 452 ntBASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 AC005041.3-201ENST00000606287 649 ntBASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 AC087392.5-201ENST00000612517 489 ntBASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 AC005618.3-201ENST00000624928 458 ntBASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 TEKT4P2-202ENST00000559466 1312 ntBASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMG20BQ9P0W2 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms