Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 AC015813.5-201ENST00000624641 1514 ntBASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 LINC02486-201ENST00000604157 3000 ntBASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHANK3Q9BYB0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 MYL6-215ENST00000549566 685 ntTSL 2 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 PCTP-206ENST00000573500 919 ntTSL 3 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 BOLA3P2-201ENST00000586496 323 ntBASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 AIRN-201ENST00000601203 4374 ntBASIC17.56■□□□□ 0.4
SHANK3Q9BYB0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 AL031577.1-201ENST00000339867 399 ntBASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 SNORA30.1-201ENST00000363193 129 ntBASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 RPL18AP15-201ENST00000430258 517 ntBASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 RN7SL33P-201ENST00000462543 342 ntBASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 KRT18P8-201ENST00000581937 1246 ntBASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 MIR1226-201ENST00000408658 75 ntBASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 RN7SL22P-201ENST00000471800 269 ntBASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 TPST2P1-201ENST00000564073 1102 ntBASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 AC092535.4-201ENST00000609548 397 ntBASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHANK3Q9BYB0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHANK3Q9BYB0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHANK3Q9BYB0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHANK3Q9BYB0 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHANK3Q9BYB0 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms