Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 RN7SL163P-201ENST00000583100 276 ntBASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RSPO3Q9BXY4 AC068587.6-202ENST00000641839 5619 ntBASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 FAM21FP-201ENST00000426241 1131 ntBASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 TSPY25P-201ENST00000429463 745 ntBASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 CHCHD2P2-201ENST00000503744 321 ntBASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 AC044849.1-201ENST00000519737 1188 ntBASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 AL008721.1-201ENST00000609964 604 ntBASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 MEG3_2.1-201ENST00000611456 105 ntBASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RSPO3Q9BXY4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RSPO3Q9BXY4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms