Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 SALL4P6-201ENST00000429385 1691 ntBASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SEC22CQ9BRL7 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SEC22CQ9BRL7 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SEC22CQ9BRL7 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
SEC22CQ9BRL7 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SEC22CQ9BRL7 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SEC22CQ9BRL7 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SEC22CQ9BRL7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SEC22CQ9BRL7 MCU-204ENST00000536019 3224 ntTSL 2 BASIC12.02□□□□□ -0.48
SEC22CQ9BRL7 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SEC22CQ9BRL7 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SEC22CQ9BRL7 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 RNU1-114P-201ENST00000365297 166 ntBASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 ACTG1P14-201ENST00000446382 1122 ntBASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 RPL13AP23-201ENST00000480739 586 ntBASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 TIMM17BP1-201ENST00000545713 516 ntBASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 AC022145.2-201ENST00000598203 171 ntBASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 AL445228.2-201ENST00000605589 952 ntBASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 CR392039.2-201ENST00000623182 509 ntBASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SEC22CQ9BRL7 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
SEC22CQ9BRL7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms