Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 FAM90A6P-201ENST00000515148 1394 ntBASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 FAM90A16P-201ENST00000526662 1395 ntBASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 FAM90A9P-201ENST00000527940 1395 ntBASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 FAM90A5P-201ENST00000528738 1395 ntBASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 FAM90A14P-201ENST00000530386 1395 ntBASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 FAM90A13P-201ENST00000534703 1395 ntBASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 KRT8P18-201ENST00000413425 1445 ntBASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 AC015802.1-201ENST00000588104 1449 ntBASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 RPL13AP3-202ENST00000494676 1473 ntBASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 ODCP-201ENST00000459650 1639 ntBASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNGAP1Q96PV0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AC006529.1-201ENST00000459978 637 ntBASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AL512310.5-201ENST00000551999 515 ntBASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AC018695.6-201ENST00000614011 534 ntBASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 HSPA7-201ENST00000445535 1927 ntBASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AC007952.5-201ENST00000572818 1486 ntBASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AL365209.1-201ENST00000624418 6473 ntBASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SYNGAP1Q96PV0 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms