Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC027369.3-201ENST00000530465 3707 ntBASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 MANEA-AS1-201ENST00000564541 2268 ntBASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 AL035414.1-201ENST00000451327 857 ntBASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 RCC2P1-201ENST00000452257 1476 ntBASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.22
CHAMP1Q96JM3 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHAMP1Q96JM3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHAMP1Q96JM3 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHAMP1Q96JM3 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHAMP1Q96JM3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC16.46■□□□□ 0.22
CHAMP1Q96JM3 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CHAMP1Q96JM3 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CHAMP1Q96JM3 EGLN3-205ENST00000547327 2849 ntBASIC16.46■□□□□ 0.22
CHAMP1Q96JM3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 FAM86MP-201ENST00000340703 885 ntBASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 AP006294.1-201ENST00000415407 339 ntBASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 AC100850.1-201ENST00000506768 649 ntBASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 MIR6720-201ENST00000611664 98 ntBASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 Z98259.2-201ENST00000641583 609 ntBASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.45■□□□□ 0.22
CHAMP1Q96JM3 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 C2orf27AP3-201ENST00000434123 579 ntBASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 TTTY23B-201ENST00000442790 549 ntBASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.44■□□□□ 0.22
CHAMP1Q96JM3 AC007551.1-201ENST00000457394 519 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms