Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC240504.1-201ENST00000395709 845 ntBASIC13.2□□□□□ -0.3
HPS1Q92902 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
HPS1Q92902 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.2□□□□□ -0.3
HPS1Q92902 ZNF736P1Y-201ENST00000440402 1276 ntBASIC13.2□□□□□ -0.3
HPS1Q92902 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.2□□□□□ -0.3
HPS1Q92902 AC022210.1-201ENST00000449856 793 ntBASIC13.2□□□□□ -0.3
HPS1Q92902 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.2□□□□□ -0.3
HPS1Q92902 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.2□□□□□ -0.3
HPS1Q92902 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC13.2□□□□□ -0.3
HPS1Q92902 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.2□□□□□ -0.3
HPS1Q92902 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC13.2□□□□□ -0.3
HPS1Q92902 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.2□□□□□ -0.3
HPS1Q92902 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.2□□□□□ -0.3
HPS1Q92902 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
HPS1Q92902 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 AL158212.4-201ENST00000624062 1286 ntBASIC13.2□□□□□ -0.3
HPS1Q92902 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HPS1Q92902 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.2□□□□□ -0.3
HPS1Q92902 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
HPS1Q92902 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HPS1Q92902 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
HPS1Q92902 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC13.19□□□□□ -0.3
HPS1Q92902 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 AL121723.1-201ENST00000445194 1519 ntBASIC13.19□□□□□ -0.3
HPS1Q92902 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
HPS1Q92902 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.19□□□□□ -0.3
HPS1Q92902 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
HPS1Q92902 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HPS1Q92902 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC13.19□□□□□ -0.3
HPS1Q92902 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.19□□□□□ -0.3
HPS1Q92902 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.19□□□□□ -0.3
HPS1Q92902 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.19□□□□□ -0.3
HPS1Q92902 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.19□□□□□ -0.3
HPS1Q92902 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.19□□□□□ -0.3
HPS1Q92902 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.19□□□□□ -0.3
HPS1Q92902 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.19□□□□□ -0.3
HPS1Q92902 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC13.19□□□□□ -0.3
HPS1Q92902 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.19□□□□□ -0.3
HPS1Q92902 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC13.19□□□□□ -0.3
HPS1Q92902 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.19□□□□□ -0.3
HPS1Q92902 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.19□□□□□ -0.3
HPS1Q92902 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.19□□□□□ -0.3
HPS1Q92902 AC133539.2-201ENST00000604757 467 ntBASIC13.19□□□□□ -0.3
HPS1Q92902 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC13.19□□□□□ -0.3
HPS1Q92902 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 AC027369.3-201ENST00000530465 3707 ntBASIC13.19□□□□□ -0.3
HPS1Q92902 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.19□□□□□ -0.3
HPS1Q92902 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC13.19□□□□□ -0.3
HPS1Q92902 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.19□□□□□ -0.3
HPS1Q92902 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.19□□□□□ -0.3
HPS1Q92902 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
HPS1Q92902 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
HPS1Q92902 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HPS1Q92902 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.19□□□□□ -0.3
HPS1Q92902 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HPS1Q92902 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HPS1Q92902 AC110048.1-201ENST00000604293 2157 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms