Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ARHGEF39Q8N4T4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 AC093462.1-201ENST00000621167 1683 ntBASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 HINT2P1-201ENST00000419438 481 ntBASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 AC078991.1-201ENST00000437297 610 ntBASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 AC145285.5-201ENST00000562217 361 ntBASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 AC091769.1-201ENST00000619576 568 ntBASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 PDXDC2P-206ENST00000534700 1315 ntBASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.29□□□□□ -0.28
ARHGEF39Q8N4T4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 FMO6P-201ENST00000236166 1620 ntBASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 AC023794.5-201ENST00000564380 2157 ntBASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 AC111170.3-201ENST00000624282 2464 ntBASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 TMCO5B-205ENST00000530020 894 ntBASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 AP000911.2-201ENST00000534330 502 ntBASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 AC007952.4-201ENST00000573866 637 ntBASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 AC005041.3-201ENST00000606287 649 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms