Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 RPL13AP3-202ENST00000494676 1473 ntBASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 GOLGA2P4-201ENST00000441462 777 ntBASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 BNIP3P42-201ENST00000454982 569 ntBASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 RPL13AP20-201ENST00000459725 609 ntBASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 AC106794.1-201ENST00000506935 792 ntBASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 RN7SL163P-201ENST00000583100 276 ntBASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 MIR4259-201ENST00000584466 101 ntBASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 BNIP3P29-201ENST00000598302 571 ntBASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 AC007663.3-201ENST00000609632 465 ntBASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 AC011447.5-201ENST00000616168 564 ntBASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 AC022748.3-201ENST00000621828 275 ntBASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 AL139158.3-201ENST00000641212 1562 ntBASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 ABCD1P2-201ENST00000429313 1601 ntBASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDKL3Q8IVW4 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDKL3Q8IVW4 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 AC090164.2-201ENST00000611487 516 ntBASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 AC068587.8-201ENST00000641239 219 ntBASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 AC004923.1-202ENST00000642106 209 ntBASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms