Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 CLPB-201ENST00000294053 3240 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 AC061965.1-201ENST00000560524 1465 ntBASIC10.6□□□□□ -0.71
HIST1H2BCP62807 AC003102.2-201ENST00000589195 1469 ntBASIC10.6□□□□□ -0.71
HIST1H2BCP62807 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 PRIMA1-202ENST00000393140 3711 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 CIC-204ENST00000572681 8218 ntTSL 5 BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 GPR17-206ENST00000544369 2598 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 ADGRG5-202ENST00000349457 3557 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 IL9RP3-201ENST00000442856 1674 ntBASIC10.6□□□□□ -0.71
HIST1H2BCP62807 ZNF169-204ENST00000481550 1696 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BCP62807 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 ANO1-207ENST00000530676 3289 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 AC092902.5-201ENST00000641650 3256 ntBASIC10.59□□□□□ -0.71
HIST1H2BCP62807 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 ARHGAP25-203ENST00000409220 2939 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 MANEA-AS1-201ENST00000564541 2268 ntBASIC10.59□□□□□ -0.71
HIST1H2BCP62807 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 PRRX1-207ENST00000497230 3501 ntTSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 FALEC-201ENST00000416894 566 ntTSL 3 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 ATP6V0CP3-201ENST00000417255 467 ntBASIC10.59□□□□□ -0.71
HIST1H2BCP62807 AL161932.2-201ENST00000435436 679 ntBASIC10.59□□□□□ -0.71
HIST1H2BCP62807 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 LINC00265-3P-201ENST00000447588 903 ntBASIC10.59□□□□□ -0.71
HIST1H2BCP62807 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 AC131206.1-201ENST00000538078 1211 ntBASIC10.59□□□□□ -0.71
HIST1H2BCP62807 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 AC107918.4-202ENST00000641623 219 ntBASIC10.59□□□□□ -0.71
HIST1H2BCP62807 AP002008.2-201ENST00000635926 4870 ntBASIC10.59□□□□□ -0.71
HIST1H2BCP62807 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 GRPEL2-201ENST00000329271 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 LGALS9-203ENST00000395473 3114 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 POU2F2-201ENST00000342301 3730 ntTSL 5 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 SPAG5-201ENST00000321765 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 ACSM5-201ENST00000331849 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 MED24-203ENST00000394127 3456 ntTSL 2 BASIC10.59□□□□□ -0.71
HIST1H2BCP62807 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
HIST1H2BCP62807 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC10.58□□□□□ -0.72
HIST1H2BCP62807 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BCP62807 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC10.58□□□□□ -0.72
HIST1H2BCP62807 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BCP62807 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BCP62807 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
HIST1H2BCP62807 MASP1-201ENST00000169293 2440 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BCP62807 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BCP62807 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms