Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
CKS1BP61024 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CKS1BP61024 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CKS1BP61024 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 FABP5-202ENST00000396359 986 ntTSL 5 BASIC10.06□□□□□ -0.8
CKS1BP61024 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.06□□□□□ -0.8
CKS1BP61024 RPL37AP1-201ENST00000412502 279 ntBASIC10.06□□□□□ -0.8
CKS1BP61024 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC10.06□□□□□ -0.8
CKS1BP61024 GPS2P2-201ENST00000430745 888 ntBASIC10.06□□□□□ -0.8
CKS1BP61024 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.06□□□□□ -0.8
CKS1BP61024 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC10.06□□□□□ -0.8
CKS1BP61024 PGAM5P1-201ENST00000518923 814 ntBASIC10.06□□□□□ -0.8
CKS1BP61024 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
CKS1BP61024 AC093520.2-201ENST00000561830 333 ntBASIC10.06□□□□□ -0.8
CKS1BP61024 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
CKS1BP61024 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC10.06□□□□□ -0.8
CKS1BP61024 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.06□□□□□ -0.8
CKS1BP61024 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.06□□□□□ -0.8
CKS1BP61024 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.06□□□□□ -0.8
CKS1BP61024 AL109936.8-201ENST00000641772 604 ntBASIC10.06□□□□□ -0.8
CKS1BP61024 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.06□□□□□ -0.8
CKS1BP61024 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CKS1BP61024 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
CKS1BP61024 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC10.06□□□□□ -0.8
CKS1BP61024 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC10.06□□□□□ -0.8
CKS1BP61024 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CKS1BP61024 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
CKS1BP61024 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC10.05□□□□□ -0.8
CKS1BP61024 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.05□□□□□ -0.8
CKS1BP61024 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
CKS1BP61024 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.05□□□□□ -0.8
CKS1BP61024 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 AL157414.3-201ENST00000624276 1954 ntBASIC10.05□□□□□ -0.8
CKS1BP61024 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC10.05□□□□□ -0.8
CKS1BP61024 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CKS1BP61024 MIR574-201ENST00000385209 96 ntBASIC10.05□□□□□ -0.8
CKS1BP61024 HNRNPFP1-201ENST00000391730 1133 ntBASIC10.05□□□□□ -0.8
CKS1BP61024 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms