Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
AP3S2P59780 EIF3FP3-201ENST00000434851 1086 ntBASIC12.23□□□□□ -0.45
AP3S2P59780 HLA-J-203ENST00000494367 1087 ntBASIC12.23□□□□□ -0.45
AP3S2P59780 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.23□□□□□ -0.45
AP3S2P59780 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.23□□□□□ -0.45
AP3S2P59780 AC138696.2-201ENST00000607376 223 ntBASIC12.23□□□□□ -0.45
AP3S2P59780 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.23□□□□□ -0.45
AP3S2P59780 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.23□□□□□ -0.45
AP3S2P59780 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
AP3S2P59780 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.23□□□□□ -0.45
AP3S2P59780 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.23□□□□□ -0.45
AP3S2P59780 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
AP3S2P59780 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC12.23□□□□□ -0.45
AP3S2P59780 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.23□□□□□ -0.45
AP3S2P59780 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
AP3S2P59780 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC12.23□□□□□ -0.45
AP3S2P59780 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AP3S2P59780 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.23□□□□□ -0.45
AP3S2P59780 AC007614.5-201ENST00000623424 8892 ntBASIC12.23□□□□□ -0.45
AP3S2P59780 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
AP3S2P59780 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 AP003969.2-201ENST00000623739 2275 ntBASIC12.22□□□□□ -0.45
AP3S2P59780 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.22□□□□□ -0.45
AP3S2P59780 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 AC025183.3-201ENST00000623526 1482 ntBASIC12.22□□□□□ -0.45
AP3S2P59780 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
AP3S2P59780 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
AP3S2P59780 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
AP3S2P59780 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.22□□□□□ -0.45
AP3S2P59780 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.22□□□□□ -0.45
AP3S2P59780 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.22□□□□□ -0.45
AP3S2P59780 GNAQP1-201ENST00000444815 1067 ntBASIC12.22□□□□□ -0.45
AP3S2P59780 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
AP3S2P59780 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
AP3S2P59780 FO681548.1-201ENST00000455617 1132 ntBASIC12.22□□□□□ -0.45
AP3S2P59780 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 VDAC1P7-201ENST00000462417 847 ntBASIC12.22□□□□□ -0.45
AP3S2P59780 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
AP3S2P59780 KRT18P56-201ENST00000507275 550 ntBASIC12.22□□□□□ -0.45
AP3S2P59780 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.22□□□□□ -0.45
AP3S2P59780 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.22□□□□□ -0.45
AP3S2P59780 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.22□□□□□ -0.45
AP3S2P59780 AL513210.1-201ENST00000629608 234 ntBASIC12.22□□□□□ -0.45
AP3S2P59780 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
AP3S2P59780 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 AC102953.2-201ENST00000609755 3026 ntBASIC12.22□□□□□ -0.45
AP3S2P59780 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AP3S2P59780 SALL4P6-201ENST00000429385 1691 ntBASIC12.22□□□□□ -0.45
AP3S2P59780 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.22□□□□□ -0.45
AP3S2P59780 AC022497.1-201ENST00000624916 3691 ntBASIC12.22□□□□□ -0.45
AP3S2P59780 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.22□□□□□ -0.45
AP3S2P59780 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S2P59780 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
AP3S2P59780 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms