Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RHBDL3P58872 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RHBDL3P58872 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RHBDL3P58872 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.48■□□□□ 0.23
RHBDL3P58872 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.48■□□□□ 0.23
RHBDL3P58872 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
RHBDL3P58872 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.48■□□□□ 0.23
RHBDL3P58872 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RHBDL3P58872 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.48■□□□□ 0.23
RHBDL3P58872 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 MIR566-201ENST00000385187 94 ntBASIC16.48■□□□□ 0.23
RHBDL3P58872 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.48■□□□□ 0.23
RHBDL3P58872 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.48■□□□□ 0.23
RHBDL3P58872 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.48■□□□□ 0.23
RHBDL3P58872 ASS1P2-201ENST00000439895 1223 ntBASIC16.48■□□□□ 0.23
RHBDL3P58872 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.48■□□□□ 0.23
RHBDL3P58872 BAK1P2-201ENST00000532665 631 ntBASIC16.48■□□□□ 0.23
RHBDL3P58872 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
RHBDL3P58872 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.48■□□□□ 0.23
RHBDL3P58872 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.48■□□□□ 0.23
RHBDL3P58872 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RHBDL3P58872 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC16.48■□□□□ 0.23
RHBDL3P58872 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.48■□□□□ 0.23
RHBDL3P58872 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RHBDL3P58872 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RHBDL3P58872 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.48■□□□□ 0.23
RHBDL3P58872 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.48■□□□□ 0.23
RHBDL3P58872 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RHBDL3P58872 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDL3P58872 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDL3P58872 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDL3P58872 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDL3P58872 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RHBDL3P58872 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
RHBDL3P58872 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDL3P58872 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDL3P58872 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 COX20P1-201ENST00000366529 357 ntBASIC16.47■□□□□ 0.23
RHBDL3P58872 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDL3P58872 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RHBDL3P58872 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.47■□□□□ 0.23
RHBDL3P58872 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC16.47■□□□□ 0.23
RHBDL3P58872 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.47■□□□□ 0.23
RHBDL3P58872 AK2P2-201ENST00000439142 405 ntBASIC16.47■□□□□ 0.23
RHBDL3P58872 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDL3P58872 RN7SL128P-201ENST00000467883 305 ntBASIC16.47■□□□□ 0.23
RHBDL3P58872 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC16.47■□□□□ 0.23
RHBDL3P58872 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
RHBDL3P58872 AC092862.1-201ENST00000541534 533 ntBASIC16.47■□□□□ 0.23
RHBDL3P58872 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC16.47■□□□□ 0.23
RHBDL3P58872 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.47■□□□□ 0.23
RHBDL3P58872 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC16.47■□□□□ 0.23
RHBDL3P58872 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.47■□□□□ 0.23
RHBDL3P58872 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 AC005777.1-201ENST00000588332 187 ntBASIC16.47■□□□□ 0.23
RHBDL3P58872 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RHBDL3P58872 AC026120.2-201ENST00000617239 309 ntBASIC16.47■□□□□ 0.23
RHBDL3P58872 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.47■□□□□ 0.23
RHBDL3P58872 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 AC005089.1-201ENST00000619486 2241 ntBASIC16.47■□□□□ 0.23
RHBDL3P58872 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.47■□□□□ 0.23
RHBDL3P58872 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.47■□□□□ 0.23
RHBDL3P58872 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RHBDL3P58872 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.47■□□□□ 0.23
RHBDL3P58872 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms