Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
WNT3AP56704 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.33□□□□□ -0.12
WNT3AP56704 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.33□□□□□ -0.12
WNT3AP56704 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
WNT3AP56704 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.33□□□□□ -0.12
WNT3AP56704 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3AP56704 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.33□□□□□ -0.12
WNT3AP56704 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
WNT3AP56704 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.32□□□□□ -0.12
WNT3AP56704 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
WNT3AP56704 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 AC015909.3-201ENST00000572855 1794 ntBASIC14.32□□□□□ -0.12
WNT3AP56704 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
WNT3AP56704 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.32□□□□□ -0.12
WNT3AP56704 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
WNT3AP56704 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.32□□□□□ -0.12
WNT3AP56704 GPAA1P2-201ENST00000417923 928 ntBASIC14.32□□□□□ -0.12
WNT3AP56704 FNTAP2-201ENST00000430308 634 ntBASIC14.32□□□□□ -0.12
WNT3AP56704 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.32□□□□□ -0.12
WNT3AP56704 BX284668.4-201ENST00000453917 508 ntBASIC14.32□□□□□ -0.12
WNT3AP56704 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.32□□□□□ -0.12
WNT3AP56704 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 SCARNA20.5-201ENST00000516991 142 ntBASIC14.32□□□□□ -0.12
WNT3AP56704 AC090857.1-201ENST00000527400 390 ntBASIC14.32□□□□□ -0.12
WNT3AP56704 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.32□□□□□ -0.12
WNT3AP56704 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.32□□□□□ -0.12
WNT3AP56704 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
WNT3AP56704 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 FRMPD2B-201ENST00000431305 1347 ntBASIC14.32□□□□□ -0.12
WNT3AP56704 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.32□□□□□ -0.12
WNT3AP56704 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.32□□□□□ -0.12
WNT3AP56704 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.32□□□□□ -0.12
WNT3AP56704 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.32□□□□□ -0.12
WNT3AP56704 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
WNT3AP56704 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.32□□□□□ -0.12
WNT3AP56704 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.32□□□□□ -0.12
WNT3AP56704 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
WNT3AP56704 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
WNT3AP56704 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
WNT3AP56704 AC138028.6-201ENST00000616106 1482 ntBASIC14.31□□□□□ -0.12
WNT3AP56704 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.31□□□□□ -0.12
WNT3AP56704 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.31□□□□□ -0.12
WNT3AP56704 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
WNT3AP56704 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.31□□□□□ -0.12
WNT3AP56704 NCLP1-201ENST00000445357 1963 ntBASIC14.31□□□□□ -0.12
WNT3AP56704 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.31□□□□□ -0.12
WNT3AP56704 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.31□□□□□ -0.12
WNT3AP56704 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
WNT3AP56704 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
WNT3AP56704 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
WNT3AP56704 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
WNT3AP56704 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
WNT3AP56704 AC126335.2-201ENST00000623362 4637 ntBASIC14.31□□□□□ -0.12
WNT3AP56704 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
WNT3AP56704 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
WNT3AP56704 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
WNT3AP56704 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
WNT3AP56704 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
WNT3AP56704 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
WNT3AP56704 AL008707.1-201ENST00000422498 534 ntBASIC14.31□□□□□ -0.12
WNT3AP56704 AL596276.2-201ENST00000447525 331 ntBASIC14.31□□□□□ -0.12
WNT3AP56704 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.31□□□□□ -0.12
WNT3AP56704 KRT8P1-201ENST00000557533 1207 ntBASIC14.31□□□□□ -0.12
WNT3AP56704 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
WNT3AP56704 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms