Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HLCSP50747 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.65□□□□□ -0.22
HLCSP50747 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.65□□□□□ -0.22
HLCSP50747 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HLCSP50747 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
HLCSP50747 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.65□□□□□ -0.22
HLCSP50747 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
HLCSP50747 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.65□□□□□ -0.22
HLCSP50747 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.65□□□□□ -0.22
HLCSP50747 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.65□□□□□ -0.22
HLCSP50747 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HLCSP50747 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.65□□□□□ -0.22
HLCSP50747 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 BX284668.4-201ENST00000453917 508 ntBASIC13.65□□□□□ -0.22
HLCSP50747 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 MYADML-201ENST00000474610 2147 ntBASIC13.65□□□□□ -0.22
HLCSP50747 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.65□□□□□ -0.22
HLCSP50747 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.65□□□□□ -0.22
HLCSP50747 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 AC009955.4-201ENST00000597192 544 ntBASIC13.65□□□□□ -0.22
HLCSP50747 AL451050.2-201ENST00000606967 682 ntBASIC13.65□□□□□ -0.22
HLCSP50747 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
HLCSP50747 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.65□□□□□ -0.22
HLCSP50747 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLCSP50747 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
HLCSP50747 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.64□□□□□ -0.23
HLCSP50747 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.64□□□□□ -0.23
HLCSP50747 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HLCSP50747 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
HLCSP50747 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.64□□□□□ -0.23
HLCSP50747 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.64□□□□□ -0.23
HLCSP50747 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.64□□□□□ -0.23
HLCSP50747 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.64□□□□□ -0.23
HLCSP50747 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HLCSP50747 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 FNTAP2-201ENST00000430308 634 ntBASIC13.64□□□□□ -0.23
HLCSP50747 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.64□□□□□ -0.23
HLCSP50747 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.64□□□□□ -0.23
HLCSP50747 GCOM2-201ENST00000509133 1104 ntBASIC13.64□□□□□ -0.23
HLCSP50747 AC044849.1-201ENST00000519737 1188 ntBASIC13.64□□□□□ -0.23
HLCSP50747 AC131206.1-201ENST00000538078 1211 ntBASIC13.64□□□□□ -0.23
HLCSP50747 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.64□□□□□ -0.23
HLCSP50747 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.64□□□□□ -0.23
HLCSP50747 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.64□□□□□ -0.23
HLCSP50747 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.64□□□□□ -0.23
HLCSP50747 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HLCSP50747 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.64□□□□□ -0.23
HLCSP50747 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.64□□□□□ -0.23
HLCSP50747 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.64□□□□□ -0.23
HLCSP50747 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLCSP50747 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.64□□□□□ -0.23
HLCSP50747 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms