Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
PCP4P48539 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC9.09□□□□□ -0.95
PCP4P48539 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC9.09□□□□□ -0.95
PCP4P48539 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC9.09□□□□□ -0.95
PCP4P48539 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 UBC-213ENST00000546120 718 ntTSL 5 BASIC9.09□□□□□ -0.95
PCP4P48539 ANKS1B-213ENST00000549025 2973 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC9.09□□□□□ -0.95
PCP4P48539 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC9.09□□□□□ -0.95
PCP4P48539 LINC02084-201ENST00000606069 1096 ntBASIC9.09□□□□□ -0.95
PCP4P48539 LINC01971-201ENST00000617888 1048 ntBASIC9.09□□□□□ -0.95
PCP4P48539 AC068338.3-201ENST00000617892 418 ntBASIC9.09□□□□□ -0.95
PCP4P48539 SMIM2-AS1-203ENST00000618753 2101 ntTSL 4 BASIC9.09□□□□□ -0.95
PCP4P48539 CHML-204ENST00000638121 920 ntTSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 CHML-205ENST00000638160 705 ntTSL 3 BASIC9.09□□□□□ -0.95
PCP4P48539 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 CD200-202ENST00000383681 1997 ntTSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 NR4A1-206ENST00000545748 3511 ntTSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 PGLYRP4-201ENST00000359650 1834 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 ITGA7-203ENST00000452168 3763 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 PRICKLE1-215ENST00000640055 3778 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
PCP4P48539 AC004584.3-201ENST00000572877 2356 ntBASIC9.09□□□□□ -0.95
PCP4P48539 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 DCTN1-227ENST00000633691 4160 ntTSL 5 BASIC9.09□□□□□ -0.95
PCP4P48539 WRAP53-201ENST00000316024 4011 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 LEMD1-AS1-201ENST00000447832 2781 ntTSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 CDC42EP3-206ENST00000611976 5124 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
PCP4P48539 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 HAP1-202ENST00000341193 3880 ntTSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
PCP4P48539 FHL1-201ENST00000345434 2458 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
PCP4P48539 MAB21L1-201ENST00000379919 3028 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
PCP4P48539 AC092964.1-201ENST00000623304 1399 ntBASIC9.09□□□□□ -0.95
PCP4P48539 SPATS2L-206ENST00000409385 2320 ntTSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 TNIP3-203ENST00000507879 1778 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 LINC00665-208ENST00000591372 2732 ntTSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 ADAMTSL3-201ENST00000286744 7336 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PCP4P48539 ZNF185-209ENST00000449285 4328 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 TMEM161B-213ENST00000514135 2035 ntTSL 2 BASIC9.09□□□□□ -0.95
PCP4P48539 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
PCP4P48539 PRPF4-202ENST00000374199 3212 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.96
PCP4P48539 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC9.08□□□□□ -0.96
PCP4P48539 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
PCP4P48539 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 TCF4-245ENST00000570177 1872 ntTSL 2 BASIC9.08□□□□□ -0.96
PCP4P48539 LINC00488-201ENST00000494582 2520 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 RNF17-202ENST00000255325 2134 ntTSL 2 BASIC9.08□□□□□ -0.96
PCP4P48539 HIPK1-AS1-204ENST00000450706 2117 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 PES1P1-201ENST00000508165 1736 ntBASIC9.08□□□□□ -0.96
PCP4P48539 PRAMEF5-201ENST00000622421 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 AC002519.1-201ENST00000570073 2792 ntBASIC9.08□□□□□ -0.96
PCP4P48539 CHRNA1-201ENST00000261007 1980 ntTSL 2 BASIC9.08□□□□□ -0.96
PCP4P48539 CHRNA1-202ENST00000348749 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC9.08□□□□□ -0.96
PCP4P48539 CLIP1-209ENST00000537178 5229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC9.08□□□□□ -0.96
PCP4P48539 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC9.08□□□□□ -0.96
PCP4P48539 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC9.08□□□□□ -0.96
PCP4P48539 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
PCP4P48539 CMKLR1-201ENST00000312143 5283 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
PCP4P48539 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 RFC5-201ENST00000392542 2449 ntTSL 2 BASIC9.08□□□□□ -0.96
PCP4P48539 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC9.08□□□□□ -0.96
PCP4P48539 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC9.08□□□□□ -0.96
PCP4P48539 AC011840.2-201ENST00000563063 1520 ntBASIC9.08□□□□□ -0.96
PCP4P48539 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC9.08□□□□□ -0.96
PCP4P48539 KCNE1B-202ENST00000618699 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 RAPGEFL1-201ENST00000264644 3429 ntTSL 5 BASIC9.08□□□□□ -0.96
PCP4P48539 PPEF2-201ENST00000286719 3414 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 MEIS2-211ENST00000559085 2538 ntTSL 2 BASIC9.08□□□□□ -0.96
PCP4P48539 NOP2-218ENST00000545200 2751 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 KCNJ3-203ENST00000544049 4523 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 AC118344.2-201ENST00000622968 4765 ntBASIC9.08□□□□□ -0.96
PCP4P48539 SLC6A4-203ENST00000401766 6543 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
PCP4P48539 ARHGEF3-201ENST00000296315 3602 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PCP4P48539 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
PCP4P48539 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms