Protein–RNA interactions for Protein: P43487

RANBP1, Ran-specific GTPase-activating protein, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1P43487 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RANBP1P43487 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC13.16□□□□□ -0.3
RANBP1P43487 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RANBP1P43487 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
RANBP1P43487 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 TOMM22P5-201ENST00000416399 439 ntBASIC13.16□□□□□ -0.3
RANBP1P43487 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
RANBP1P43487 MCCD1P2-201ENST00000423228 335 ntBASIC13.16□□□□□ -0.3
RANBP1P43487 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.16□□□□□ -0.3
RANBP1P43487 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.16□□□□□ -0.3
RANBP1P43487 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.16□□□□□ -0.3
RANBP1P43487 KRT8P48-201ENST00000515599 1220 ntBASIC13.16□□□□□ -0.3
RANBP1P43487 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.16□□□□□ -0.3
RANBP1P43487 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.16□□□□□ -0.3
RANBP1P43487 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.16□□□□□ -0.3
RANBP1P43487 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
RANBP1P43487 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.16□□□□□ -0.3
RANBP1P43487 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.16□□□□□ -0.3
RANBP1P43487 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.16□□□□□ -0.3
RANBP1P43487 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.16□□□□□ -0.3
RANBP1P43487 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.16□□□□□ -0.3
RANBP1P43487 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 TLE3-222ENST00000560589 3509 ntTSL 5 BASIC13.16□□□□□ -0.3
RANBP1P43487 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
RANBP1P43487 AC018665.1-201ENST00000622927 1362 ntBASIC13.16□□□□□ -0.3
RANBP1P43487 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RANBP1P43487 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RANBP1P43487 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RANBP1P43487 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
RANBP1P43487 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RANBP1P43487 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RANBP1P43487 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RANBP1P43487 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RANBP1P43487 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.15□□□□□ -0.3
RANBP1P43487 AL645937.2-201ENST00000396808 931 ntBASIC13.15□□□□□ -0.3
RANBP1P43487 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.15□□□□□ -0.3
RANBP1P43487 AC005237.2-201ENST00000434368 219 ntBASIC13.15□□□□□ -0.3
RANBP1P43487 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.15□□□□□ -0.3
RANBP1P43487 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.15□□□□□ -0.3
RANBP1P43487 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
RANBP1P43487 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.15□□□□□ -0.3
RANBP1P43487 AC003101.2-201ENST00000612557 442 ntBASIC13.15□□□□□ -0.3
RANBP1P43487 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
RANBP1P43487 AC092865.6-201ENST00000642101 219 ntBASIC13.15□□□□□ -0.3
RANBP1P43487 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RANBP1P43487 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 GPR156-202ENST00000461057 2525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.15□□□□□ -0.3
RANBP1P43487 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.15□□□□□ -0.3
RANBP1P43487 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC13.15□□□□□ -0.3
RANBP1P43487 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC13.15□□□□□ -0.3
RANBP1P43487 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RANBP1P43487 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC13.15□□□□□ -0.3
RANBP1P43487 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RANBP1P43487 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
RANBP1P43487 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RANBP1P43487 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.15□□□□□ -0.31
RANBP1P43487 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RANBP1P43487 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.15□□□□□ -0.31
RANBP1P43487 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RANBP1P43487 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RANBP1P43487 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC13.14□□□□□ -0.31
RANBP1P43487 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC13.14□□□□□ -0.31
RANBP1P43487 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.14□□□□□ -0.31
RANBP1P43487 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RANBP1P43487 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RANBP1P43487 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms