Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SLC1A1P43005 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A1P43005 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 AL365181.3-201ENST00000605886 3222 ntBASIC14.86□□□□□ -0.03
SLC1A1P43005 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SLC1A1P43005 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
SLC1A1P43005 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 U91328.1-201ENST00000437528 223 ntBASIC14.86□□□□□ -0.03
SLC1A1P43005 ACA64.2-201ENST00000459014 129 ntBASIC14.86□□□□□ -0.03
SLC1A1P43005 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC1A1P43005 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC1A1P43005 AP005482.1-201ENST00000563722 1273 ntBASIC14.86□□□□□ -0.03
SLC1A1P43005 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A1P43005 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SLC1A1P43005 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC1A1P43005 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC1A1P43005 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SLC1A1P43005 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SLC1A1P43005 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SLC1A1P43005 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC1A1P43005 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC1A1P43005 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC1A1P43005 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SLC1A1P43005 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 AC020917.4-201ENST00000623994 1999 ntBASIC14.85□□□□□ -0.03
SLC1A1P43005 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
SLC1A1P43005 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SLC1A1P43005 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
SLC1A1P43005 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SLC1A1P43005 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.85□□□□□ -0.03
SLC1A1P43005 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC1A1P43005 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
SLC1A1P43005 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC1A1P43005 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC1A1P43005 AC011742.3-201ENST00000439053 820 ntBASIC14.85□□□□□ -0.03
SLC1A1P43005 MTX1P1-201ENST00000440904 838 ntBASIC14.85□□□□□ -0.03
SLC1A1P43005 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC1A1P43005 RPSAP36-202ENST00000494591 1261 ntBASIC14.85□□□□□ -0.03
SLC1A1P43005 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.85□□□□□ -0.03
SLC1A1P43005 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC1A1P43005 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC1A1P43005 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC1A1P43005 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC1A1P43005 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC1A1P43005 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 BNIP3P13-201ENST00000599968 566 ntBASIC14.85□□□□□ -0.03
SLC1A1P43005 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.85□□□□□ -0.03
SLC1A1P43005 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC1A1P43005 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.85□□□□□ -0.03
SLC1A1P43005 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SLC1A1P43005 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC1A1P43005 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 AL358781.1-202ENST00000321081 1360 ntBASIC14.85□□□□□ -0.03
SLC1A1P43005 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC1A1P43005 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC1A1P43005 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SLC1A1P43005 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SLC1A1P43005 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A1P43005 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms