Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.07□□□□□ -0.32
RFC3P40938 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.07□□□□□ -0.32
RFC3P40938 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.07□□□□□ -0.32
RFC3P40938 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.07□□□□□ -0.32
RFC3P40938 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 IQSEC3P1-201ENST00000538799 536 ntBASIC13.07□□□□□ -0.32
RFC3P40938 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 AC093752.3-201ENST00000567343 901 ntBASIC13.07□□□□□ -0.32
RFC3P40938 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.07□□□□□ -0.32
RFC3P40938 SIGLEC18P-201ENST00000602271 909 ntBASIC13.07□□□□□ -0.32
RFC3P40938 AC007881.3-201ENST00000608897 607 ntBASIC13.07□□□□□ -0.32
RFC3P40938 MIR7845-201ENST00000618396 99 ntBASIC13.07□□□□□ -0.32
RFC3P40938 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.07□□□□□ -0.32
RFC3P40938 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RFC3P40938 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RFC3P40938 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFC3P40938 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.06□□□□□ -0.32
RFC3P40938 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.06□□□□□ -0.32
RFC3P40938 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RFC3P40938 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RFC3P40938 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RFC3P40938 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RFC3P40938 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RFC3P40938 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
RFC3P40938 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 LAP3P2-201ENST00000454686 1454 ntBASIC13.06□□□□□ -0.32
RFC3P40938 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.06□□□□□ -0.32
RFC3P40938 MIR557-201ENST00000385239 98 ntBASIC13.06□□□□□ -0.32
RFC3P40938 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
RFC3P40938 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 AC078991.1-201ENST00000437297 610 ntBASIC13.06□□□□□ -0.32
RFC3P40938 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.06□□□□□ -0.32
RFC3P40938 DUTP3-201ENST00000450025 415 ntBASIC13.06□□□□□ -0.32
RFC3P40938 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RFC3P40938 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
RFC3P40938 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.06□□□□□ -0.32
RFC3P40938 RN7SL555P-201ENST00000584742 339 ntBASIC13.06□□□□□ -0.32
RFC3P40938 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.06□□□□□ -0.32
RFC3P40938 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.06□□□□□ -0.32
RFC3P40938 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.06□□□□□ -0.32
RFC3P40938 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
RFC3P40938 AC018635.2-201ENST00000608625 364 ntBASIC13.06□□□□□ -0.32
RFC3P40938 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.06□□□□□ -0.32
RFC3P40938 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 BRD7P5-201ENST00000299197 1822 ntBASIC13.06□□□□□ -0.32
RFC3P40938 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.06□□□□□ -0.32
RFC3P40938 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 Z82170.1-201ENST00000625081 3192 ntBASIC13.06□□□□□ -0.32
RFC3P40938 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFC3P40938 AC113367.3-201ENST00000508316 1912 ntBASIC13.05□□□□□ -0.32
RFC3P40938 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RFC3P40938 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RFC3P40938 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.05□□□□□ -0.32
RFC3P40938 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms