Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.99□□□□□ -0.01
RFC1P35251 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.99□□□□□ -0.01
RFC1P35251 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.99□□□□□ -0.01
RFC1P35251 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RFC1P35251 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.99□□□□□ -0.01
RFC1P35251 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 AC103592.1-201ENST00000394513 664 ntBASIC14.99□□□□□ -0.01
RFC1P35251 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.99□□□□□ -0.01
RFC1P35251 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.99□□□□□ -0.01
RFC1P35251 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.99□□□□□ -0.01
RFC1P35251 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.99□□□□□ -0.01
RFC1P35251 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.99□□□□□ -0.01
RFC1P35251 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.99□□□□□ -0.01
RFC1P35251 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
RFC1P35251 AL118558.3-201ENST00000607414 1079 ntBASIC14.99□□□□□ -0.01
RFC1P35251 AL157813.1-201ENST00000612996 587 ntBASIC14.99□□□□□ -0.01
RFC1P35251 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
RFC1P35251 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.99□□□□□ -0.01
RFC1P35251 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.99□□□□□ -0.01
RFC1P35251 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.99□□□□□ -0.01
RFC1P35251 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.99□□□□□ -0.01
RFC1P35251 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.99□□□□□ -0.01
RFC1P35251 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RFC1P35251 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.99□□□□□ -0.01
RFC1P35251 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC1P35251 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC1P35251 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.98□□□□□ -0.01
RFC1P35251 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
RFC1P35251 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RFC1P35251 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RFC1P35251 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC1P35251 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RFC1P35251 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.98□□□□□ -0.01
RFC1P35251 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.98□□□□□ -0.01
RFC1P35251 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
RFC1P35251 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC1P35251 AC131212.3-201ENST00000624087 4219 ntBASIC14.98□□□□□ -0.01
RFC1P35251 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC1P35251 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 HMGA1P1-201ENST00000415560 1062 ntBASIC14.98□□□□□ -0.01
RFC1P35251 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.98□□□□□ -0.01
RFC1P35251 ACTBP11-201ENST00000436287 1126 ntBASIC14.98□□□□□ -0.01
RFC1P35251 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.98□□□□□ -0.01
RFC1P35251 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 MARK2P5-201ENST00000507649 634 ntBASIC14.98□□□□□ -0.01
RFC1P35251 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.98□□□□□ -0.01
RFC1P35251 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC1P35251 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC1P35251 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.98□□□□□ -0.01
RFC1P35251 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC1P35251 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 LINC01815-202ENST00000641468 1409 ntBASIC14.98□□□□□ -0.01
RFC1P35251 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC1P35251 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC1P35251 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC1P35251 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RFC1P35251 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
RFC1P35251 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms