Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.11□□□□□ -0.15
VARSP26640 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.11□□□□□ -0.15
VARSP26640 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.11□□□□□ -0.15
VARSP26640 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VARSP26640 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.11□□□□□ -0.15
VARSP26640 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.11□□□□□ -0.15
VARSP26640 AP001972.5-201ENST00000624624 2338 ntBASIC14.11□□□□□ -0.15
VARSP26640 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.11□□□□□ -0.15
VARSP26640 AC009093.10-201ENST00000641956 1442 ntBASIC14.11□□□□□ -0.15
VARSP26640 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VARSP26640 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
VARSP26640 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
VARSP26640 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
VARSP26640 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VARSP26640 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.1□□□□□ -0.15
VARSP26640 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.1□□□□□ -0.15
VARSP26640 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.1□□□□□ -0.15
VARSP26640 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.1□□□□□ -0.15
VARSP26640 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.1□□□□□ -0.15
VARSP26640 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.1□□□□□ -0.15
VARSP26640 AL035414.1-201ENST00000451327 857 ntBASIC14.1□□□□□ -0.15
VARSP26640 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.1□□□□□ -0.15
VARSP26640 IGHJ2P-201ENST00000454480 60 ntBASIC14.1□□□□□ -0.15
VARSP26640 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.1□□□□□ -0.15
VARSP26640 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.1□□□□□ -0.15
VARSP26640 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 MIR4783-201ENST00000580343 82 ntBASIC14.1□□□□□ -0.15
VARSP26640 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VARSP26640 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC14.1□□□□□ -0.15
VARSP26640 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.1□□□□□ -0.15
VARSP26640 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 DNM1P41-201ENST00000623634 3350 ntBASIC14.1□□□□□ -0.15
VARSP26640 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.1□□□□□ -0.15
VARSP26640 AC023794.5-201ENST00000564380 2157 ntBASIC14.1□□□□□ -0.15
VARSP26640 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.1□□□□□ -0.15
VARSP26640 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.1□□□□□ -0.15
VARSP26640 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VARSP26640 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.1□□□□□ -0.15
VARSP26640 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.1□□□□□ -0.15
VARSP26640 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VARSP26640 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VARSP26640 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VARSP26640 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms