Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.28■□□□□ 0.36
ITGA6P23229 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.28■□□□□ 0.36
ITGA6P23229 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.28■□□□□ 0.36
ITGA6P23229 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 AL161772.1-201ENST00000610494 4412 ntBASIC17.28■□□□□ 0.36
ITGA6P23229 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.28■□□□□ 0.36
ITGA6P23229 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.28■□□□□ 0.36
ITGA6P23229 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC17.28■□□□□ 0.36
ITGA6P23229 DDC-204ENST00000426377 1700 ntTSL 3 BASIC17.28■□□□□ 0.36
ITGA6P23229 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ITGA6P23229 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ITGA6P23229 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ITGA6P23229 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 BCAS2P2-201ENST00000425064 674 ntBASIC17.28■□□□□ 0.36
ITGA6P23229 KRT18P66-201ENST00000452970 1269 ntBASIC17.28■□□□□ 0.36
ITGA6P23229 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ITGA6P23229 REEP5-205ENST00000504247 480 ntTSL 5 BASIC17.28■□□□□ 0.36
ITGA6P23229 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC17.28■□□□□ 0.36
ITGA6P23229 AC013553.1-201ENST00000560906 267 ntBASIC17.28■□□□□ 0.36
ITGA6P23229 C2orf69P1-201ENST00000563532 1093 ntBASIC17.28■□□□□ 0.36
ITGA6P23229 TRMT112P3-201ENST00000580149 358 ntBASIC17.28■□□□□ 0.36
ITGA6P23229 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.28■□□□□ 0.36
ITGA6P23229 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ITGA6P23229 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ITGA6P23229 AC068418.2-201ENST00000577309 3703 ntBASIC17.28■□□□□ 0.36
ITGA6P23229 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
ITGA6P23229 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
ITGA6P23229 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ITGA6P23229 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.28■□□□□ 0.36
ITGA6P23229 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA6P23229 AC008620.2-201ENST00000510294 1569 ntBASIC17.28■□□□□ 0.36
ITGA6P23229 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
ITGA6P23229 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA6P23229 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ITGA6P23229 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA6P23229 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA6P23229 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ITGA6P23229 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA6P23229 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.27■□□□□ 0.36
ITGA6P23229 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA6P23229 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.27■□□□□ 0.36
ITGA6P23229 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA6P23229 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.27■□□□□ 0.36
ITGA6P23229 AL365181.1-201ENST00000564032 1828 ntBASIC17.27■□□□□ 0.36
ITGA6P23229 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ITGA6P23229 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ITGA6P23229 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA6P23229 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.27■□□□□ 0.36
ITGA6P23229 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC17.27■□□□□ 0.36
ITGA6P23229 AC005722.1-201ENST00000431878 964 ntBASIC17.27■□□□□ 0.36
ITGA6P23229 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.27■□□□□ 0.36
ITGA6P23229 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA6P23229 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.27■□□□□ 0.36
ITGA6P23229 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA6P23229 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.27■□□□□ 0.36
ITGA6P23229 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.27■□□□□ 0.36
ITGA6P23229 RN7SL556P-201ENST00000582856 298 ntBASIC17.27■□□□□ 0.36
ITGA6P23229 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC17.27■□□□□ 0.36
ITGA6P23229 COQ4-204ENST00000608951 781 ntTSL 2 BASIC17.27■□□□□ 0.36
ITGA6P23229 AC010976.2-201ENST00000609697 852 ntBASIC17.27■□□□□ 0.36
ITGA6P23229 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.27■□□□□ 0.35
ITGA6P23229 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ITGA6P23229 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
ITGA6P23229 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.27■□□□□ 0.35
ITGA6P23229 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.27■□□□□ 0.35
ITGA6P23229 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ITGA6P23229 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ITGA6P23229 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
ITGA6P23229 AC007191.1-201ENST00000623179 2995 ntBASIC17.26■□□□□ 0.35
ITGA6P23229 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 AC061965.1-201ENST00000560524 1465 ntBASIC17.26■□□□□ 0.35
ITGA6P23229 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 EML1-203ENST00000334192 4064 ntTSL 5 BASIC17.26■□□□□ 0.35
ITGA6P23229 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ITGA6P23229 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC17.26■□□□□ 0.35
ITGA6P23229 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ITGA6P23229 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.26■□□□□ 0.35
ITGA6P23229 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 MIR1307-201ENST00000408840 149 ntBASIC17.26■□□□□ 0.35
ITGA6P23229 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ITGA6P23229 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms