Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.3□□□□□ -0.28
NR4A1P22736 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.3□□□□□ -0.28
NR4A1P22736 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.3□□□□□ -0.28
NR4A1P22736 RPSAP52-203ENST00000622976 1023 ntBASIC13.3□□□□□ -0.28
NR4A1P22736 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.3□□□□□ -0.28
NR4A1P22736 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC13.3□□□□□ -0.28
NR4A1P22736 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.3□□□□□ -0.28
NR4A1P22736 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.3□□□□□ -0.28
NR4A1P22736 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.3□□□□□ -0.28
NR4A1P22736 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NR4A1P22736 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.3□□□□□ -0.28
NR4A1P22736 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NR4A1P22736 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NR4A1P22736 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC13.3□□□□□ -0.28
NR4A1P22736 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
NR4A1P22736 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.3□□□□□ -0.28
NR4A1P22736 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
NR4A1P22736 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.29□□□□□ -0.28
NR4A1P22736 AC004066.1-201ENST00000502488 802 ntBASIC13.29□□□□□ -0.28
NR4A1P22736 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.29□□□□□ -0.28
NR4A1P22736 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.29□□□□□ -0.28
NR4A1P22736 AP001582.1-201ENST00000525856 295 ntBASIC13.29□□□□□ -0.28
NR4A1P22736 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
NR4A1P22736 TDH-203ENST00000531764 1110 ntBASIC13.29□□□□□ -0.28
NR4A1P22736 PTP4A1P2-201ENST00000546033 454 ntBASIC13.29□□□□□ -0.28
NR4A1P22736 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.29□□□□□ -0.28
NR4A1P22736 MIR5189-201ENST00000577370 114 ntBASIC13.29□□□□□ -0.28
NR4A1P22736 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.29□□□□□ -0.28
NR4A1P22736 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.29□□□□□ -0.28
NR4A1P22736 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.29□□□□□ -0.28
NR4A1P22736 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
NR4A1P22736 BX539320.1-201ENST00000623759 877 ntBASIC13.29□□□□□ -0.28
NR4A1P22736 AC005252.2-201ENST00000624630 1141 ntBASIC13.29□□□□□ -0.28
NR4A1P22736 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 AL021155.1-201ENST00000438808 2637 ntBASIC13.29□□□□□ -0.28
NR4A1P22736 REXO1L1P-201ENST00000379010 6598 ntBASIC13.29□□□□□ -0.28
NR4A1P22736 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
NR4A1P22736 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.29□□□□□ -0.28
NR4A1P22736 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.29□□□□□ -0.28
NR4A1P22736 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 AC092117.1-201ENST00000621230 3250 ntBASIC13.29□□□□□ -0.28
NR4A1P22736 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.29□□□□□ -0.28
NR4A1P22736 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NR4A1P22736 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
NR4A1P22736 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
NR4A1P22736 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.29□□□□□ -0.28
NR4A1P22736 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
NR4A1P22736 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NR4A1P22736 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.28□□□□□ -0.28
NR4A1P22736 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms