Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB4AP20338 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
RAB4AP20338 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC10.95□□□□□ -0.66
RAB4AP20338 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB4AP20338 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC10.94□□□□□ -0.66
RAB4AP20338 UXT-AS1-201ENST00000590504 1525 ntBASIC10.94□□□□□ -0.66
RAB4AP20338 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.94□□□□□ -0.66
RAB4AP20338 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC10.94□□□□□ -0.66
RAB4AP20338 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
RAB4AP20338 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.94□□□□□ -0.66
RAB4AP20338 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC10.94□□□□□ -0.66
RAB4AP20338 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
RAB4AP20338 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC10.94□□□□□ -0.66
RAB4AP20338 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
RAB4AP20338 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 AC079140.1-201ENST00000508039 487 ntBASIC10.94□□□□□ -0.66
RAB4AP20338 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.94□□□□□ -0.66
RAB4AP20338 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 SLC25A39P2-201ENST00000537614 270 ntBASIC10.94□□□□□ -0.66
RAB4AP20338 BANF1P1-201ENST00000553684 263 ntBASIC10.94□□□□□ -0.66
RAB4AP20338 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.94□□□□□ -0.66
RAB4AP20338 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC10.94□□□□□ -0.66
RAB4AP20338 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 AL445228.2-201ENST00000605589 952 ntBASIC10.94□□□□□ -0.66
RAB4AP20338 AC026120.1-201ENST00000611536 926 ntBASIC10.94□□□□□ -0.66
RAB4AP20338 AC010503.4-201ENST00000615487 688 ntBASIC10.94□□□□□ -0.66
RAB4AP20338 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 AC084121.4-201ENST00000641598 221 ntBASIC10.94□□□□□ -0.66
RAB4AP20338 AF228730.8-201ENST00000642140 221 ntBASIC10.94□□□□□ -0.66
RAB4AP20338 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
RAB4AP20338 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
RAB4AP20338 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.94□□□□□ -0.66
RAB4AP20338 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
RAB4AP20338 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC10.94□□□□□ -0.66
RAB4AP20338 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 AL157414.3-201ENST00000624276 1954 ntBASIC10.94□□□□□ -0.66
RAB4AP20338 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.94□□□□□ -0.66
RAB4AP20338 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB4AP20338 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
RAB4AP20338 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC10.93□□□□□ -0.66
RAB4AP20338 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RAB4AP20338 LPGAT1-202ENST00000366997 7782 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB4AP20338 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC10.93□□□□□ -0.66
RAB4AP20338 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
RAB4AP20338 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RAB4AP20338 RNF10-201ENST00000325954 3825 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RAB4AP20338 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RAB4AP20338 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RAB4AP20338 KRT8P12-202ENST00000472924 1397 ntBASIC10.93□□□□□ -0.66
RAB4AP20338 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RAB4AP20338 PARP6-223ENST00000616176 2102 ntTSL 5 BASIC10.93□□□□□ -0.66
RAB4AP20338 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB4AP20338 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC10.93□□□□□ -0.66
RAB4AP20338 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RAB4AP20338 FUT6-201ENST00000286955 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB4AP20338 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB4AP20338 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC10.93□□□□□ -0.66
RAB4AP20338 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB4AP20338 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB4AP20338 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB4AP20338 AC090643.2-201ENST00000623442 2029 ntBASIC10.93□□□□□ -0.66
RAB4AP20338 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms