Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.51□□□□□ -0.41
ATF1P18846 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.51□□□□□ -0.41
ATF1P18846 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ATF1P18846 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
ATF1P18846 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.5□□□□□ -0.41
ATF1P18846 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.5□□□□□ -0.41
ATF1P18846 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.5□□□□□ -0.41
ATF1P18846 COX5BP1-201ENST00000507622 393 ntBASIC12.5□□□□□ -0.41
ATF1P18846 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.5□□□□□ -0.41
ATF1P18846 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.5□□□□□ -0.41
ATF1P18846 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.5□□□□□ -0.41
ATF1P18846 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.5□□□□□ -0.41
ATF1P18846 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.5□□□□□ -0.41
ATF1P18846 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.5□□□□□ -0.41
ATF1P18846 RN7SL713P-201ENST00000582127 302 ntBASIC12.5□□□□□ -0.41
ATF1P18846 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.5□□□□□ -0.41
ATF1P18846 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ATF1P18846 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 AL354989.2-201ENST00000435838 1540 ntBASIC12.5□□□□□ -0.41
ATF1P18846 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.5□□□□□ -0.41
ATF1P18846 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.5□□□□□ -0.41
ATF1P18846 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
ATF1P18846 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 AC102953.2-201ENST00000609755 3026 ntBASIC12.5□□□□□ -0.41
ATF1P18846 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
ATF1P18846 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATF1P18846 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
ATF1P18846 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ATF1P18846 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.49□□□□□ -0.41
ATF1P18846 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.49□□□□□ -0.41
ATF1P18846 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ATF1P18846 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.49□□□□□ -0.41
ATF1P18846 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 AL136309.1-201ENST00000403917 691 ntBASIC12.49□□□□□ -0.41
ATF1P18846 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.49□□□□□ -0.41
ATF1P18846 AC016694.1-201ENST00000434179 700 ntBASIC12.49□□□□□ -0.41
ATF1P18846 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ATF1P18846 FTH1P14-201ENST00000482930 551 ntBASIC12.49□□□□□ -0.41
ATF1P18846 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.49□□□□□ -0.41
ATF1P18846 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.49□□□□□ -0.41
ATF1P18846 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.49□□□□□ -0.41
ATF1P18846 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms