Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AC021321.1-201ENST00000607397 1113 ntBASIC15.19■□□□□ 0.02
SYN1P17600 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC15.19■□□□□ 0.02
SYN1P17600 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYN1P17600 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.19■□□□□ 0.02
SYN1P17600 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYN1P17600 AC064850.1-201ENST00000413279 1398 ntBASIC15.19■□□□□ 0.02
SYN1P17600 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC15.19■□□□□ 0.02
SYN1P17600 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.19■□□□□ 0.02
SYN1P17600 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYN1P17600 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYN1P17600 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.18■□□□□ 0.02
SYN1P17600 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.18■□□□□ 0.02
SYN1P17600 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.18■□□□□ 0.02
SYN1P17600 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.18■□□□□ 0.02
SYN1P17600 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SYN1P17600 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SYN1P17600 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.18■□□□□ 0.02
SYN1P17600 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 KRT18P33-201ENST00000398525 1043 ntBASIC15.18■□□□□ 0.02
SYN1P17600 PGK1P2-201ENST00000431702 1214 ntBASIC15.18■□□□□ 0.02
SYN1P17600 IGHVII-74-1-201ENST00000517572 241 ntBASIC15.18■□□□□ 0.02
SYN1P17600 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.18■□□□□ 0.02
SYN1P17600 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC15.18■□□□□ 0.02
SYN1P17600 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC15.18■□□□□ 0.02
SYN1P17600 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC15.18■□□□□ 0.02
SYN1P17600 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC15.18■□□□□ 0.02
SYN1P17600 BOLA3P2-201ENST00000586496 323 ntBASIC15.18■□□□□ 0.02
SYN1P17600 AC134878.2-201ENST00000620700 1265 ntBASIC15.18■□□□□ 0.02
SYN1P17600 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.18■□□□□ 0.02
SYN1P17600 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SYN1P17600 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SYN1P17600 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SYN1P17600 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYN1P17600 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
SYN1P17600 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 AC106785.2-201ENST00000564385 1319 ntBASIC15.17■□□□□ 0.02
SYN1P17600 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC15.17■□□□□ 0.02
SYN1P17600 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC15.17■□□□□ 0.02
SYN1P17600 AL109954.1-202ENST00000564051 2148 ntBASIC15.17■□□□□ 0.02
SYN1P17600 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.17■□□□□ 0.02
SYN1P17600 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.17■□□□□ 0.02
SYN1P17600 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SYN1P17600 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SYN1P17600 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
SYN1P17600 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SYN1P17600 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 MIR181D-201ENST00000384853 137 ntBASIC15.17■□□□□ 0.02
SYN1P17600 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SYN1P17600 MPV17-209ENST00000405983 859 ntTSL 5 BASIC15.17■□□□□ 0.02
SYN1P17600 MIR1307-201ENST00000408840 149 ntBASIC15.17■□□□□ 0.02
SYN1P17600 EEF1DP2-201ENST00000433698 843 ntBASIC15.17■□□□□ 0.02
SYN1P17600 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC15.17■□□□□ 0.02
SYN1P17600 HNRNPA3P12-201ENST00000437410 1063 ntBASIC15.17■□□□□ 0.02
SYN1P17600 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 AL161727.1-201ENST00000457409 530 ntBASIC15.17■□□□□ 0.02
SYN1P17600 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC15.17■□□□□ 0.02
SYN1P17600 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC15.17■□□□□ 0.02
SYN1P17600 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SYN1P17600 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SYN1P17600 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SYN1P17600 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SYN1P17600 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.17■□□□□ 0.02
SYN1P17600 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.17■□□□□ 0.02
SYN1P17600 AC022532.1-201ENST00000624563 1728 ntBASIC15.17■□□□□ 0.02
SYN1P17600 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SYN1P17600 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.17■□□□□ 0.02
SYN1P17600 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SYN1P17600 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms