Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.1■□□□□ 0.33
MYCNP04198 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 AC011742.3-201ENST00000439053 820 ntBASIC17.1■□□□□ 0.33
MYCNP04198 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC17.1■□□□□ 0.33
MYCNP04198 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.1■□□□□ 0.33
MYCNP04198 AC097382.1-201ENST00000441093 591 ntTSL 5 BASIC17.1■□□□□ 0.33
MYCNP04198 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC17.1■□□□□ 0.33
MYCNP04198 FTLP1-201ENST00000449155 526 ntBASIC17.1■□□□□ 0.33
MYCNP04198 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC17.1■□□□□ 0.33
MYCNP04198 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC17.1■□□□□ 0.33
MYCNP04198 NPM1P19-201ENST00000450070 712 ntBASIC17.1■□□□□ 0.33
MYCNP04198 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC17.1■□□□□ 0.33
MYCNP04198 NUP210P1-202ENST00000504322 710 ntBASIC17.1■□□□□ 0.33
MYCNP04198 AC100850.1-201ENST00000506768 649 ntBASIC17.1■□□□□ 0.33
MYCNP04198 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.1■□□□□ 0.33
MYCNP04198 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC17.1■□□□□ 0.33
MYCNP04198 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MYCNP04198 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.1■□□□□ 0.33
MYCNP04198 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC17.1■□□□□ 0.33
MYCNP04198 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.1■□□□□ 0.33
MYCNP04198 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC17.1■□□□□ 0.33
MYCNP04198 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.1■□□□□ 0.33
MYCNP04198 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.1■□□□□ 0.33
MYCNP04198 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC17.1■□□□□ 0.33
MYCNP04198 AL353600.1-201ENST00000608148 251 ntBASIC17.1■□□□□ 0.33
MYCNP04198 AL121652.1-201ENST00000608851 448 ntBASIC17.1■□□□□ 0.33
MYCNP04198 ZACNP1-201ENST00000612259 710 ntBASIC17.1■□□□□ 0.33
MYCNP04198 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC17.1■□□□□ 0.33
MYCNP04198 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.1■□□□□ 0.33
MYCNP04198 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MYCNP04198 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.1■□□□□ 0.33
MYCNP04198 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MYCNP04198 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.1■□□□□ 0.33
MYCNP04198 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MYCNP04198 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MYCNP04198 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MYCNP04198 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.1■□□□□ 0.33
MYCNP04198 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.1■□□□□ 0.33
MYCNP04198 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MYCNP04198 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.1■□□□□ 0.33
MYCNP04198 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MYCNP04198 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MYCNP04198 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.09■□□□□ 0.33
MYCNP04198 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
MYCNP04198 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MYCNP04198 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
MYCNP04198 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MYCNP04198 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.09■□□□□ 0.33
MYCNP04198 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
MYCNP04198 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MYCNP04198 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MYCNP04198 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MYCNP04198 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MYCNP04198 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MYCNP04198 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
MYCNP04198 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MYCNP04198 DEFB105B-201ENST00000335510 331 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MYCNP04198 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MYCNP04198 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MYCNP04198 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.09■□□□□ 0.33
MYCNP04198 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC17.09■□□□□ 0.33
MYCNP04198 ACTG1P2-201ENST00000415776 1125 ntBASIC17.09■□□□□ 0.33
MYCNP04198 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MYCNP04198 RPL12P2-201ENST00000424565 493 ntBASIC17.09■□□□□ 0.33
MYCNP04198 ACTG1P11-201ENST00000425411 1125 ntBASIC17.09■□□□□ 0.33
MYCNP04198 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC17.09■□□□□ 0.33
MYCNP04198 AC073475.1-201ENST00000434012 592 ntBASIC17.09■□□□□ 0.33
MYCNP04198 AC253536.4-201ENST00000440539 267 ntBASIC17.09■□□□□ 0.33
MYCNP04198 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.09■□□□□ 0.33
MYCNP04198 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC17.09■□□□□ 0.33
MYCNP04198 AC012618.1-201ENST00000461223 412 ntBASIC17.09■□□□□ 0.33
MYCNP04198 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.09■□□□□ 0.33
MYCNP04198 AGGF1P3-201ENST00000493675 1213 ntBASIC17.09■□□□□ 0.33
MYCNP04198 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.09■□□□□ 0.33
MYCNP04198 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.09■□□□□ 0.33
MYCNP04198 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC17.09■□□□□ 0.33
MYCNP04198 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.09■□□□□ 0.33
MYCNP04198 YWHAZP1-201ENST00000556286 722 ntBASIC17.09■□□□□ 0.33
MYCNP04198 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.09■□□□□ 0.33
MYCNP04198 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MYCNP04198 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.09■□□□□ 0.33
MYCNP04198 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MYCNP04198 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC17.09■□□□□ 0.33
MYCNP04198 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.09■□□□□ 0.33
MYCNP04198 AP001462.1-201ENST00000594089 452 ntBASIC17.09■□□□□ 0.33
MYCNP04198 AC026741.1-201ENST00000605892 482 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms